New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	1842445 =	9 (0.410)	4 (0.200)	4/184	1.5	41.9%	coding (2275/2322 nt)	h16_B1632	conserved hypothetical protein
	?	AM260480	1842516 =	3 (0.150)					coding (2204/2322 nt)	h16_B1632	conserved hypothetical protein

GCGCTAGGACGCGCGGGTGAGCGGCGCGGCCGCGCCGCGGACGCGTTCCGGCTTGGCGCCGAGCGCCGTGCGGATCCGCTCCAGCATTGCCGTCTGCTCGACAGTGGGCCTGGCGCCAAGCAGGCGCTCATCGACACGCAGCTTCTCCGCCAGCGCCTGCAGCCGCTGGCGGTCGGCCTGATACCTGAGCAAGGCCGGCAGCGTCGCGAGCGCC  >  AM260480/1842395‑1842608                                                                                                                          |                                                                                             gcgcTAGGACGCGCGGGTGAGCGGCGCGGCCGCGCCGCGGACGCGTTCCGGCTTGGCGCCGAGCGCCGTGCGGATCCGCTCCAGCATTGCCGTCTGCTCGACAGTGGGCCTGGCGCCAAGCAGGCGCTCATCGa                                                                                  <  1:824299/134‑1 (MQ=255)                         cgcggcCGCGCCGCGGACGCGTTCCGGCTTGGCGCCGAGCGCCGTGCGGATCCGCTCCAGCATTGCCGTCTGCTCGACAGTGGGCCTGGCGCCAAGCAGGCGCTCATCGACACGCAGCTTCTCCGCCAGCGCCt                                                          <  1:684063/134‑1 (MQ=255)                                                                             agacggcaatgctggagctgatccgcacggcgctcggcgccaagcAGGCGCTCATCGACACGCAGCTTCTCCGCCAGCGCCTGCAGCCGCTGGCGGTCgg                                        >  1:887698‑M2/46‑100 (MQ=255)                                                                             agacggcaatgctggagctgatccgcacggcgctcggcgccaagcAGGCGCTCATCGACACGCAGCTTCTCCGCCAGCGCCTGCAGCCGCTGGCGGTCgg                                        <  2:887698‑M2/55‑1 (MQ=255)                                                                                  cAGCATTGCCGTCTGCTCGACAGTGGGCCTGGCGCCAAGCAGGCGCTCATCGACACGCAGCTTCTCCGCCAGCGCCTGCAGCCGCTGGCGGTCGGCCTGATACCTGAGCAAGGCCGGCAGCGTCGCGAGCGcc  <  2:552182/133‑1 (MQ=255)                                                                                   caatgctggagcggatccgcacggcgctcggcgccaagcAGGCGCTCATCGACACGCAGCTTCTCCGCCAGCGCCTGCAGCCGCTGGCGGTCGGCCTGATACCTGAGCAAGGc                     >  1:452461‑M2/40‑113 (MQ=255)                                                                                   caatgctggagcggatccgcacggcgctcggcgccaagcAGGCGCTCATCGACACGCAGCTTCTCCGCCAGCGCCTGCAGCCGCTGGCGGTCGGCCTGATACCTGAGCAAGGc                     <  2:452461‑M2/74‑1 (MQ=255)                                                                                                                          |                                                                                             GCGCTAGGACGCGCGGGTGAGCGGCGCGGCCGCGCCGCGGACGCGTTCCGGCTTGGCGCCGAGCGCCGTGCGGATCCGCTCCAGCATTGCCGTCTGCTCGACAGTGGGCCTGGCGCCAAGCAGGCGCTCATCGACACGCAGCTTCTCCGCCAGCGCCTGCAGCCGCTGGCGGTCGGCCTGATACCTGAGCAAGGCCGGCAGCGTCGCGAGCGCC  >  AM260480/1842395‑1842608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.