| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 2311318 = | 0 (0.000) | 21 (0.940) | 17/198 | 0.3 | 100% | coding (450/462 nt) | h16_B2054 | putative transporter |
| ? | AY305378 | = 437418 | NA (NA) | noncoding (1/2 nt) | direct | target site duplication | |||||
TCGCCTGTTGGCGCATCACCTGAAGGGCATGATGATCGATCGCTCGACCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCACGTTTGGCGCGAGAGAATCGCCTGTCCGCATACGCCTAGCAGCGGGCGGTTC > AY305378/437301‑437533 | tCGCCTGTTGGCGCATCACCTGAAGGGCATGATGATCGATCGCTCGACCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTAAGACAGATTCTGaa > 1:793336/1‑133 (MQ=255) gcATCACCTGAAGGGCATGATGATCGATCGCTCGACCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcagg > 1:89420‑M2/1‑106 (MQ=255) ggCATGATGATCGATCGCTCGACCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGc > 2:887782/1‑133 (MQ=255) atgatCGATCGCTCGACCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatg < 1:734318‑M2/134‑48 (MQ=255) gatcgatcGCTCGACCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTa < 2:407052‑M2/86‑2 (MQ=255) gatcgatcGCTCGACCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTa > 1:407052‑M2/1‑85 (MQ=255) gatcgatcGCTCGACCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTAAGACAGATTCt < 2:837043/97‑1 (MQ=255) gatcgatcGCTCGACCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTAAGACAGATTCt > 1:837043/1‑97 (MQ=255) gACCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatgcgccaaggctgat > 1:634490‑M2/1‑73 (MQ=255) aCCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatgcgccaaggctgatca > 2:734318‑M2/1‑72 (MQ=255) cGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCAc < 2:793336/134‑1 (MQ=255) aGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGAAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCACGTTTgg > 2:954627/1‑134 (MQ=255) cATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggtt < 1:295454‑M2/83‑31 (MQ=255) cATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTGAGTaaaggccggccacaccggcatctgcaggtt > 2:295454‑M2/1‑53 (MQ=255) tCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggtt < 2:707300‑M2/75‑31 (MQ=255) tCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggtt > 1:707300‑M2/1‑45 (MQ=255) gTCTCATGACATGACAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatgc < 2:889339‑M2/84‑49 (MQ=255) gTCTCATGACATGACAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatgc > 1:889339‑M2/1‑36 (MQ=255) atgacatgacAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatgcgccaaggctgat > 1:567242‑M2/1‑31 (MQ=255) atgacatgacAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatgcgccaaggctgat < 2:567242‑M2/91‑61 (MQ=255) atgacatgacAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggca > 2:279139‑M2/1‑31 (MQ=255) atgacatgacAATACTTTCGAGAAGGTTAGTaaaggccggccacaccggca < 1:279139‑M2/51‑21 (MQ=255) atgacatgacAATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGc > 2:176170/1‑67 (MQ=255) atgacatgacAATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGc < 1:176170/67‑1 (MQ=255) gacatgacaATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatgcgccaaggctgatcagcaccagcaccacggcgttgagcagcgcgcccttccagctgaa < 2:994354‑M2/134‑106 (MQ=255) gacatgacaATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGc < 1:1028677/65‑1 (MQ=255) gacatgacaATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGc > 2:1028677/1‑65 (MQ=255) gacatgacaATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCACGTTTGGCGCGAGAGAATCGCCTGTCCGCATACGCCTagcag > 2:964621/1‑134 (MQ=255) atgacaATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatgcgccaaggctgatcagcaccagcaccacggcgttgagcagcgcgcccttccagctgaatt < 1:532470‑M2/133‑108 (MQ=255) atgacaATACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatgcgccaaggctgatcagcaccagcaccacggcgttgagcagcgcgcccttccagctgaatt < 1:382270‑M2/133‑108 (MQ=255) atgacaATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAg > 1:611613/1‑72 (MQ=255) atgacaATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAg < 2:611613/72‑1 (MQ=255) acaATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCACGTTTGGCGCGAGAGAATCGCCTGTCCGCATACGCCTAGCAgcgggc < 1:887782/133‑1 (MQ=255) caATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCACGTTTGGCGCGAGAGAATCGCCTGTCCGCATACGCCTAGCAgcgggcgg < 1:954627/134‑1 (MQ=255) tACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgat < 1:995039‑M2/52‑34 (MQ=255) tACTTTCGAGAAGGTTAGTaaaggccggccacaccggcatctgcaggttgat > 2:995039‑M2/1‑19 (MQ=255) tACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCACGTTTGGCGCGAGAGAATCGCCTGTCCGCATACGCCTagcag > 2:204487/1‑124 (MQ=255) tACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCACGTTTGGCGCGAGAGAATCGCCTGTCCGCATACGCCTagcag < 1:204487/124‑1 (MQ=255) tACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCACGTTTGGCGCGAGAGAATCGCCTGTCCGCATACGCCTAGCAGCGGGCGGTTc > 1:449606/1‑134 (MQ=255) ttCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACcgcg > 2:719692/1‑46 (MQ=255) ttCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACcgcg < 1:719692/46‑1 (MQ=255) gaAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatgcgccaaggctgatcagcaccagc > 2:271917‑M2/1‑10 (MQ=255) gaAGGTTAGTaaaggccggccacaccggcatctgcaggttgatgccgtagacgaatgcgccaaggctgatcagcaccagc < 1:271917‑M2/80‑71 (MQ=255) gaAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGc > 1:925905/1‑46 (MQ=255) gaAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGc < 2:925905/46‑1 (MQ=255) gaAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCACGTTTGGCGCGAGAGAATCGCCTGTCCGCATACGCCTAGCAGCGGGCGGTTc < 2:846366/125‑1 (MQ=255) gaAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCACGTTTGGCGCGAGAGAATCGCCTGTCCGCATACGCCTAGCAGCGGGCGGTTc > 1:846366/1‑125 (MQ=255) | TCGCCTGTTGGCGCATCACCTGAAGGGCATGATGATCGATCGCTCGACCGTCCGAGTTCCGTTTGCATTTCATTCCCGTATTGTCTCATGACATGACAATACTTTCGAGAAGGTTAGTAAGACAGATTCTGAAAAGCCCGACGACCGCGAGAGCCGGCTACCAGAATGCCGCTAGAAGCCACGTTTGGCGCGAGAGAATCGCCTGTCCGCATACGCCTAGCAGCGGGCGGTTC > AY305378/437301‑437533 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |