New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 675911	24 (0.880)	7 (0.300)	7/184	1.3	26.0%	coding (186/705 nt)	h16_A0635	Uracil‑DNA glycosylase
	?	AM260479	= 675897	19 (0.810)					coding (200/705 nt)	h16_A0635	Uracil‑DNA glycosylase

GTCGCGGTCCAGCCCCGCGCTGGCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260479/675770‑675911 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgccggcgccgCCCATGCGCGCATCATGCTGGTTGGCGAGCAACCGGGGGCGCAGGAAGACCTGCAGGGCTCCCCCTTCGTCGGCCCGGCCGGGCACCTCCTGGACGAAGCACTGGCC  <  AM260479/675897‑675791                                                                                                                                                                                                                                                           GTCGCGGTCCAGCCCCGCGCTGGCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGC                                                                                                                     >  1:62957/1‑134                      GGCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCC                                                                                                              >  1:164758/1‑120                                         AGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGCCCATGCGCGCATCATGCTGGTTGGCGAGCAA                                                                             <  2:62957/134‑1                                                          GACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGCCCA                                                                                                         >  1:631209/1‑89                                                          GACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGCCCA                                                                                                         <  2:631209/89‑1                                                            CGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGCCCATGCGCGCATCATGCTGGT                                                                                       <  1:728399/105‑1                                                                                                           ACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGCCCATGCGCGCATCATGCTGGTTGGCGAGCAACCGGGGGCGCAGGAAGACCTGCAGGGCTCCCCCTTCG                                        <  2:728399/105‑1                                                                                                                             TGGGCGGCGCCGGCGCCGCCCATGCGCGCATCATGCTGGTTGGCGAGCAACCGGGGGCGCAGGAAGA                                                            >  1:214349/1‑67                                                                                                                             TGGGCGGCGCCGGCGCCGCCCATGCGCGCATCATGCTGGTTGGCGAGCAACCGGGGGCGCAGGAAGA                                                            <  2:214349/67‑1                                                                                                                                  GGCGCCGGCGCCGCCCATGCGCGCATCATGCTGGTTGGCGAGCAACCGGGGGCGCAGGAAGACCTGCAGGGCTCCCCCTTCGTCGGCCCGGCCGGGCACCTCCTGGACGAAGCACTGGCC  >  2:164758/1‑120                                                                                                                                                                                                                                                           GTCGCGGTCCAGCCCCGCGCTGGCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260479/675770‑675911 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgccggcgccgCCCATGCGCGCATCATGCTGGTTGGCGAGCAACCGGGGGCGCAGGAAGACCTGCAGGGCTCCCCCTTCGTCGGCCCGGCCGGGCACCTCCTGGACGAAGCACTGGCC  <  AM260479/675897‑675791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.