New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 675911	24 (0.880)	7 (0.300)	7/184	1.3	26.0%	coding (186/705 nt)	h16_A0635	Uracil‑DNA glycosylase
	?	AM260479	= 675897	19 (0.810)					coding (200/705 nt)	h16_A0635	Uracil‑DNA glycosylase

GTCGCGGTCCAGCCCCGCGCTGGCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATGGGGGCACGGCGCGCTGTGCTGCT  >  AM260479/675770‑676027                                                                                                                                |                                                                                                                                   gTCGCGGTCCAGCCCCGCGCTGGCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGC                                                                                                                              >  1:62957‑M1/1‑134 (MQ=255)             ccccGCGCTGGCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCa                                                                                                                  <  2:20399/134‑1 (MQ=255)                      ggCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGcggcgccggcgcc                                                                                                                       >  2:164758‑M2/1‑107 (MQ=255)                      ggCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTggg                                                                                                         >  1:461659/1‑134 (MQ=255)                      ggCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCC                                                                                                                       >  1:164758‑M1/1‑120 (MQ=255)                       gCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTTGGt                                                                                                        <  1:820547/134‑1 (MQ=255)                                     cAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCcac                                                                                           >  2:908059/1‑133 (MQ=255)                                         aggTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGcccatgcgcgcatcatgctggttggcgagcaa                                                                                      <  2:62957‑M1/134‑33 (MQ=255)                                          ggTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACggg                                                                                     <  2:211828/134‑1 (MQ=255)                                                 ggccgggccgACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGcc                                                                              >  2:195338/1‑134 (MQ=255)                                                  gccgggccgACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCg                                                                             >  1:999152/1‑134 (MQ=255)                                                          gacgaAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGccca                                                                                                                  >  1:631209‑M1/1‑85 (MQ=255)                                                          gacgaAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGccca                                                                                                                  <  2:631209‑M1/89‑5 (MQ=255)                                                            cgaAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGcggcgccggcgccgcccatgcgcgcatcatgctggt                                                                                                <  2:728399‑M2/105‑37 (MQ=255)                                                            cgaAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGcccatgcgcgcatcatgctggt                                                                                                <  1:728399‑M1/105‑23 (MQ=255)                                                                  gggAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGgttcagttca                                                             <  2:999152/134‑1 (MQ=255)                                                                           gCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCt                                                     >  2:286514/1‑133 (MQ=255)                                                                            cAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGa                                                   <  1:195338/134‑1 (MQ=255)                                                                              ggTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACg                                                 <  2:467948/134‑1 (MQ=255)                                                                                tCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGcggcgccggcgccgccca                                                                                                                  >  1:214349‑M2/1‑49 (MQ=255)                                                                                tCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGcggcgccggcgccgccca                                                                                                                  <  2:214349‑M2/67‑19 (MQ=255)                                                                                          cccccGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCtg                                     >  2:557227/1‑134 (MQ=255)                                                                                          cccccGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCtg                                     >  1:221931/1‑134 (MQ=255)                                                                                             ccGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGc                                  >  1:866277/1‑134 (MQ=255)                                                                                              cGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCt                                 >  1:866959/1‑134 (MQ=255)                                                                                                 ttGCTCGCCAACCAGCATGATGCGCGCATGGGcggcgccggcgccgcccatgcgcgcatcatgctggttggcgagcaaccgggggcgcaggaagacctgcagggctcccccttcgtcggcccggccgggcacct                              <  2:62957‑M2/134‑103 (MQ=255)                                                                                                        ccAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATggg                       >  1:886312/1‑134 (MQ=255)                                                                                                          aaCCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATggggg                     <  2:866277/134‑1 (MQ=255)                                                                                                           aCCAGCATGATGCGCGCATGGGcggcgccggcgccgcccatgcgcgcatcatgctggttggcgagcaaccgggggcgcaggaagacctgcagggctcccccttcg                                                 <  1:728399‑M2/105‑84 (MQ=255)                                                                                                           aCCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGcccatgcgcgcatcatgctggttggcgagcaaccgggggcgcaggaagacctgcagggctcccccttcg                                                 <  2:728399‑M1/105‑70 (MQ=255)                                                                                                             cAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATGGGGGCAc                  <  1:908059/134‑1 (MQ=255)                                                                                                                             tGGGcggcgccggcgccgcccatgcgcgcatcatgctggttggcgagcaaccgggggcgcaggaagacctgcagggctcccccttcgtc                                               <  2:631209‑M2/89‑86 (MQ=255)                                                                                                                             tGGGcggcgccggcgccgcccatgcgcgcatcatgctggttggcgagcaaccgggggcgcaggaagacctgcagggctcccccttcgtc                                               >  1:631209‑M2/1‑4 (MQ=255)                                                                                                                             tGGGCGGCGCCGGCGCCGcccatgcgcgcatcatgctggttggcgagcaaccgggggcgcaggaaga                                                                     <  2:214349‑M1/67‑50 (MQ=255)                                                                                                                             tGGGCGGCGCCGGCGCCGcccatgcgcgcatcatgctggttggcgagcaaccgggggcgcaggaaga                                                                     >  1:214349‑M1/1‑18 (MQ=255)                                                                                                                             tGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATGGGGGCACGGCGCGCTGTgctgct  >  2:19170/1‑134 (MQ=255)                                                                                                                                |                                                                                                                                   GTCGCGGTCCAGCCCCGCGCTGGCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATGGGGGCACGGCGCGCTGTGCTGCT  >  AM260479/675770‑676027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.