| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 675911 | 24 (0.880) | 7 (0.300) | 7/184 | 1.3 | 26.0% | coding (186/705 nt) | h16_A0635 | Uracil‑DNA glycosylase |
| ? | AM260479 | = 675897 | 19 (0.810) | coding (200/705 nt) | h16_A0635 | Uracil‑DNA glycosylase | |||||
CCCCGCGCTGGCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATGGGGGCACGGCGCGCTGTGCTGCTGTCGG > AM260479/675782‑676032 | ccccGCGCTGGCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCa < 2:20399/134‑1 (MQ=255) ggCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTggg > 1:461659/1‑134 (MQ=255) gCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTTGGt < 1:820547/134‑1 (MQ=255) cAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCcac > 2:908059/1‑133 (MQ=255) aggTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGcccatgcgcgcatcatgctggttggcgagcaa < 2:62957‑M1/134‑33 (MQ=255) ggTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACggg < 2:211828/134‑1 (MQ=255) ggccgggccgACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGcc > 2:195338/1‑134 (MQ=255) gccgggccgACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCg > 1:999152/1‑134 (MQ=255) gacgaAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGccca < 2:631209‑M1/89‑5 (MQ=255) gacgaAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGccca > 1:631209‑M1/1‑85 (MQ=255) cgaAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGcccatgcgcgcatcatgctggt < 1:728399‑M1/105‑23 (MQ=255) gggAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGgttcagttca < 2:999152/134‑1 (MQ=255) gCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCt > 2:286514/1‑133 (MQ=255) cAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGa < 1:195338/134‑1 (MQ=255) ggTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACg < 2:467948/134‑1 (MQ=255) cccccGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCtg > 2:557227/1‑134 (MQ=255) cccccGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCtg > 1:221931/1‑134 (MQ=255) ccGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGc > 1:866277/1‑134 (MQ=255) cGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCt > 1:866959/1‑134 (MQ=255) ccAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATggg > 1:886312/1‑134 (MQ=255) aaCCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATggggg < 2:866277/134‑1 (MQ=255) aCCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGcccatgcgcgcatcatgctggttggcgagcaaccgggggcgcaggaagacctgcagggctcccccttcg < 2:728399‑M1/105‑70 (MQ=255) cAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATGGGGGCAc < 1:908059/134‑1 (MQ=255) tGGGCGGCGCCGGCGCCGcccatgcgcgcatcatgctggttggcgagcaaccgggggcgcaggaaga > 1:214349‑M1/1‑18 (MQ=255) tGGGCGGCGCCGGCGCCGcccatgcgcgcatcatgctggttggcgagcaaccgggggcgcaggaaga < 2:214349‑M1/67‑50 (MQ=255) tGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATGGGGGCACGGCGCGCTGTgctgct > 2:19170/1‑134 (MQ=255) ggcgccggcgccGcccatgcgcgcatcatgctggttggcgagcaaccgggggcgcaggaagacctgcagggctcccccttcgtcggcccggccgggcacctcctggacgaagcactggcc > 2:164758‑M1/1‑13 (MQ=255) ggcgccggcgccGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATGGGGGCACGGCGCGCTGTGCTGCTGTCgg > 2:141784/1‑134 (MQ=255) gcgccggcgccgGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCg < 1:943218/53‑1 (MQ=255) gcgccggcgccgGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCg > 2:943218/1‑53 (MQ=255) ggcgccggGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATGGGGGCACgg < 2:136898/109‑1 (MQ=255) ggcgccggGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATGGGGGCACgg > 1:136898/1‑109 (MQ=255) | CCCCGCGCTGGCCAGTGCTTCGTCCAGGAGGTGCCCGGCCGGGCCGACGAAGGGGGAGCCCTGCAGGTCTTCCTGCGCCCCCGGTTGCTCGCCAACCAGCATGATGCGCGCATGGGCGGCGCCGGCGCCGGGCACGCCCTGGGTGGCATTGCGCCACAACGGGCAACGCCGGCATTGGTTCAGTTCATCGCGGCTGACGGGCAGCTTCCTGTGCTCGGGCATGGGGGCACGGCGCGCTGTGCTGCTGTCGG > AM260479/675782‑676032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |