| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AM260479 | 973,838 | Δ1,320 bp | [h16_A0881]–h16_A0882 | [h16_A0881], h16_A0882 | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AM260479 | 973838–974895 | 975157 | 263–1320 | 29 [0] | [0] 29 | [h16_A0881]–h16_A0882 | [h16_A0881],h16_A0882 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 973837 | NA (NA) | 26 (1.070) | 19/190 | 0.3 | NA | noncoding (2/1312 nt) | ISAE1 | insertion sequence ISAE1 isolog |
| ? | AM260479 | 975158 = | NA (NA) | intergenic (‑201/+329) | h16_A0881/h16_A0883 | ISAE1 Orf2 fusion protein/Hypothetical protein | |||||
TCTGGCCGCTGGGGCACGGTGCCGATGACCCAGCGGCCGCTTTTGGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260479/973715‑973837‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaaggtttgcTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTGCGTTTTCTTCCAGGCCTGGGCCAGTACGACCTTGTCGGAAAGGAGCGCCACCGTGGGCGC > AM260479/975158‑975288 TCTGGCCGCTGGGGCACGGTGCCGATGACCCAGCGGCCGCTTTTGGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGAC > 2:16501/1‑134 TGGCCGCTGGGGCACGGTGCCGATGACCCAGCGGCCGCTTTTGGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGAC < 2:753307/132‑1 GCACGGTGCCGATGACCCAGCGGCCGCTTTTGGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTC > 1:294037/1‑133 CGGCCGCTTTTGGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAA > 2:185094/1‑134 CGGCCGCTTTTGGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAG < 2:693873/116‑1 CGGCCGCTTTTGGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAG > 1:693873/1‑116 GCTTTTGGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGT < 2:736148/134‑1 TTGGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTAT < 2:497353/133‑1 TTGGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTAT < 2:294037/133‑1 GGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGT < 1:185094/133‑1 TTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTGCGTTTTCTTCCA < 1:900920/134‑1 TTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTAT > 1:143673/1‑103 TTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTAT < 2:143673/103‑1 GATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTGCGTTTTCTTCCAGGCC < 1:22147/134‑1 CTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTGCGTTTTCTTCCA < 2:924506/121‑1 CTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTGCGTTTTCTTCCA > 1:924506/1‑121 CTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTAT < 2:484423/90‑1 CTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTAT > 1:484423/1‑90 TGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTAT < 2:343650/89‑1 TGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTAT > 1:343650/1‑89 GCAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTGCGTTTTCTTCCAGGCCTGGGCCAGTACGACC > 1:857672/1‑134 CAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGG < 2:440601/71‑1 CAGCGTTTGCGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGG > 1:440601/1‑71 CGCCCACTGTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTGCGTTTTCTTCCAGGCCTGGGCCAGTACGACCTTGTCGGAAA < 1:597535/134‑1 GTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTG > 1:826045/1‑85 GTTCCAAGGTTTGCTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTG < 2:826045/85‑1 CTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTGCGTTTTCTTCCAGGCCTGGGCCAGTACGACCTTGTCGGAAAGGAGCGCCACCGTGGGCGC > 1:668445/1‑132 CTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTGCGTTTTCTTCCA < 1:845936/84‑1 CTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTGCGTTTTCTTCCA > 2:845936/1‑84 TCTGGCCGCTGGGGCACGGTGCCGATGACCCAGCGGCCGCTTTTGGGTGCGGGAACCATCCTGGCCGCCTGGTTAAGATATTGGCCTGTGCGCAGCGTTTGCGCCCACTGTTCCAAGGTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260479/973715‑973837‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaaggtttgcTCAAGATCGACCGCCGACGTGTCGAGTTCGAGCGTGTCGGCAAACCAGTTATGTTTGCGGATATAGGTGTGCGTTTTCTTCCAGGCCTGGGCCAGTACGACCTTGTCGGAAAGGAGCGCCACCGTGGGCGC > AM260479/975158‑975288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |