| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 2605709 = | 12 (0.440) | 3 (0.130) | 3/180 | 2.2 | 22.9% | coding (594/2868 nt) | addB | two domain protein: Inactivated superfamily I helicase and RecB family exonuclease |
| ? | AM260479 | 2605725 = | 10 (0.430) | coding (578/2868 nt) | addB | two domain protein: Inactivated superfamily I helicase and RecB family exonuclease | |||||
CGATCGCGCCGGCCTGCTGCAGGGCGCGCTGGAACGGACCTATTCGCATCTGTCCGAGCGCTTCCTCGGCGAAGAGGCGCGCATCGTGCTGGCATTCTGGCAGGCGCTGTCCGGCCCGGACGATCCGCTGCCGGCGCGGCGCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/2605856‑2605709‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcggcgccgcgccGGCAGCGGATCGTCCGGGCCGGACAGCGCCTGCCAGAATGCCAGCACGATGCGCGCCTCTTCGCCGAGGAAGCGCTCGGACAGATGCGAATAGGTCCGTTCCAGCGCGCCCTGCAGCAGGCCGGCGC > AM260479/2605725‑2605851 CGATCGCGCCGGCCTGCTGCAGGGCGCGCTGGAACGGACCTATTCGCATCTGTCCGAGCGCTTCCTCGGCGAAGAGGCGCGCATCGTGCTGGCATTCTGGCAGGCGCTGTCCGGCCCGGACGATCCGCTGCCGG < 1:377111/134‑1 CCGGCCTGCTGCAGGGCGCGCTGGAACGGACCTATTCGCATCTGTCCGAGCGCTTCCTCGGCGAAGAGGCGCGCATCGTGCTGGCATTCTGGCAGGCGCTGTCCGGCCCGGACGATCCGCTGCCGGCGCGGCGC > 2:962461/1‑134 GCGCGCGGGAACGGACCTATTCGCATCTGTCCGAGCGCTTCCTCGGCGAAGAGGCGCGCATCGTGCTGGCATTCTGGCAGGCGCTGTCCGGCCCGGACGATCCGCTGCCGGCGCGGCGCCGCGCCGGCAGCGGA < 1:39232/134‑1 TCGTGCTGGCATTCTGGCAGGCGCTGTCCGGCCCGGACGATCCGCTGCCGGCGCGGCGCCGCGCCGGCAGCGGATCGTCCGGGCCG > 1:220584/1‑86 CGGCCCGGACGATCCGCTGCCGGCGCGGCGCCGCGCCGGCAGCGGATCGTCCGGGCCGGACAGCGCCTGCCAGAATGCCAGCACGA > 2:220584/1‑86 CCGCGCCGGCAGCGGATCGTCCGGGCCGGACAGCGCCTGCCAGAATGCCAGCACGATGCGCGCCTCTTCGCCGAGGAAGCGCTCGGACAGATGCGAATAGGTCCGTTCCAGCGCGCCCTGCAGCAGGCCGGCGC > 2:418395/1‑134 CGATCGCGCCGGCCTGCTGCAGGGCGCGCTGGAACGGACCTATTCGCATCTGTCCGAGCGCTTCCTCGGCGAAGAGGCGCGCATCGTGCTGGCATTCTGGCAGGCGCTGTCCGGCCCGGACGATCCGCTGCCGGCGCGGCGCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/2605856‑2605709‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcggcgccgcgccGGCAGCGGATCGTCCGGGCCGGACAGCGCCTGCCAGAATGCCAGCACGATGCGCGCCTCTTCGCCGAGGAAGCGCTCGGACAGATGCGAATAGGTCCGTTCCAGCGCGCCCTGCAGCAGGCCGGCGC > AM260479/2605725‑2605851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |