New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 668127	16 (0.560)	4 (0.160)	4/188	2.1	20.9%	coding (662/1026 nt)	bpHI	4‑Hydroxy‑2‑oxovalerate aldolase
	?	AM260480	= 668115	16 (0.640)					coding (674/1026 nt)	bpHI	4‑Hydroxy‑2‑oxovalerate aldolase

AGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260480/668029‑668127 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgcggcggGACTGGGCGCCGGTGCCGGCAATACGCCGATGGAAGTGCTGGTGGCCGTGTGCGAGCGCATGGGCATCGAGACCGGCGTCGACGTCTACCGCATCGCCGACGTGGCCGAAGACCTGGTGGTGCCGATCA  <  AM260480/668115‑667987                                                                                                                                                                                                                                      AGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGGACTGG                                                                                                                             <  2:618708/105‑1                                    CACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGGACTGGGCGCCGGTGCC                                                                                                                  <  1:340806/81‑1                                    CACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGGACTGGGCGCCGGTGCC                                                                                                                  >  2:340806/1‑81                                                                                  CCAGTCCCGCCGCGGCGGGACTGGGCGCCGGTGCCGGCAATACGCCGATGGAAGTGCTGGTGGCCGTGTGCGAGCGCATGGGCATCGAGACCGGCGTCGACGTCT                                            <  1:618708/105‑1                                                                                               GGCGGGACTGGGCGCCGGTGCCGGCAATACGCCGATGGAAGTGCTGGTGGCCGTGTGCGAGCGCATGGGCATCGAGACCGGCGTCGACGTCTACCGCATCGCCGACGTGGCCGAAGACCTGGTGGTGCCGATCA  <  1:581850/134‑1                                                                                                                                                                                                                                      AGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260480/668029‑668127 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgcggcggGACTGGGCGCCGGTGCCGGCAATACGCCGATGGAAGTGCTGGTGGCCGTGTGCGAGCGCATGGGCATCGAGACCGGCGTCGACGTCTACCGCATCGCCGACGTGGCCGAAGACCTGGTGGTGCCGATCA  <  AM260480/668115‑667987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.