New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 668127	16 (0.560)	4 (0.160)	4/188	2.1	20.9%	coding (662/1026 nt)	bpHI	4‑Hydroxy‑2‑oxovalerate aldolase
	?	AM260480	= 668115	16 (0.640)					coding (674/1026 nt)	bpHI	4‑Hydroxy‑2‑oxovalerate aldolase

TGATCGGCACCACCAGGTCTTCGGCCACGTCGGCGATGCGGTAGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTTGTGGTGGCCGTGGAAGCCCAGCTCGGTCTCGGGGCGCAGCGCCTGCCG  >  AM260480/667987‑668239                                                                                                                                 |                                                                                                                             tGATCGGCACCACCAGGTCTTCGGCCACGTCGGCGATGCGGTAGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCccgcc                                                                                                                         <  1:581850‑M2/134‑6 (MQ=255)                                ggCGATGCGGTAGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAgg                                                                                          >  1:672509/1‑134 (MQ=255)                                  cGATGCGGTAGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTc                                                                                                                              >  2:621332/1‑96 (MQ=255)                                  cGATGCGGTAGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTc                                                                                                                              <  1:621332/96‑1 (MQ=255)                                           aGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCccgccgcggcgggactgg                                                                                                            <  1:618708‑M2/105‑19 (MQ=255)                                           aGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGgactgg                                                                                                            <  2:618708‑M1/105‑7 (MQ=255)                                                  gACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAAt                                                                        <  2:764416/134‑1 (MQ=255)                                                   aCGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAAtt                                                                       >  1:388395/1‑134 (MQ=255)                                                   aCGCCGGTCTCGATGCCAATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAAtt                                                                       <  2:305346/134‑1 (MQ=255)                                                        ggTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCa                                                                  <  1:858982/134‑1 (MQ=255)                                                                        cgcTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGt                                                   <  2:439080/133‑1 (MQ=255)                                                                          cTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTtgt                                                >  1:393605/1‑134 (MQ=255)                                                                              cacaCGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGgactgggcgccggtgcc                                                                                                 <  1:340806‑M1/81‑18 (MQ=255)                                                                              cacaCGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGgactgggcgccggtgcc                                                                                                 >  2:340806‑M1/1‑64 (MQ=255)                                                                                 acGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGtt                                                  >  1:125258/1‑125 (MQ=255)                                                                                 acGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGtt                                                  <  2:125258/125‑1 (MQ=255)                                                                                      caccaGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACg                                                                <  1:773711/106‑1 (MQ=255)                                                                                      caccaGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACg                                                                >  2:773711/1‑106 (MQ=255)                                                                                                   aTCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGgcgagc                                                                            >  2:1108251/1‑81 (MQ=255)                                                                                                   aTCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGgcgagc                                                                            <  1:1108251/81‑1 (MQ=255)                                                                                                   aTCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTTGTGGTGGCCGTGGAAGCCCAGCTCGGt                       >  1:137521/1‑134 (MQ=255)                                                                                                        cGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGACGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTTGTGGTGGCCGTGGAAGCCCAGCTCGGTCTCgg                  >  2:604143/1‑134 (MQ=255)                                                                                                                 ggCACCGGCGCCCAGTCccgccgcggcgggactgggcgccggtgccggcaatacgccgatggaagtgctggtggccgtgtg                                                              >  2:340806‑M2/1‑17 (MQ=255)                                                                                                                 ggCACCGGCGCCCAGTCccgccgcggcgggactgggcgccggtgccggcaatacgccgatggaagtgctggtggccgtgtg                                                              <  1:340806‑M2/81‑65 (MQ=255)                                                                                                                        gcgcCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTTGTGGTGGCCGTGGAAGCCCAGCTCGGTCTCGGGGCGCAGCGCCTGCCg  <  2:672509/134‑1 (MQ=255)                                                                                                                            ccAGTCccgccgcggcgggactgggcgccggtgccggcaatacgccgatggaagtgctggtggccgtgtgcgagcgcatgggcatcgagaccggcgtcgacgtct                           <  2:618708‑M2/105‑100 (MQ=255)                                                                                                                            ccAGTCCCGCCGCGGCGGgactgggcgccggtgccggcaatacgccgatggaagtgctggtggccgtgtgcgagcgcatgggcatcgagaccggcgtcgacgtct                           <  1:618708‑M1/105‑88 (MQ=255)                                                                                                                                 |                                                                                                                             TGATCGGCACCACCAGGTCTTCGGCCACGTCGGCGATGCGGTAGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTTGTGGTGGCCGTGGAAGCCCAGCTCGGTCTCGGGGCGCAGCGCCTGCCG  >  AM260480/667987‑668239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.