New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 668127	16 (0.560)	4 (0.160)	4/188	2.1	20.9%	coding (662/1026 nt)	bpHI	4‑Hydroxy‑2‑oxovalerate aldolase
	?	AM260480	= 668115	16 (0.640)					coding (674/1026 nt)	bpHI	4‑Hydroxy‑2‑oxovalerate aldolase

GGCGATGCGGTAGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTTGTGGTGGCCGTGGAAGCCCAGCTCGGTCTCGGGGCGCAGCGCCTGCCGCACGGCGCCCAGCTTCT  >  AM260480/668018‑668256                                                                                                              |                                                                                                                                  ggCGATGCGGTAGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAgg                                                                                                           >  1:672509/1‑134 (MQ=255)            aGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGgactgg                                                                                                                             <  2:618708‑M1/105‑7 (MQ=255)                   gACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAAt                                                                                         <  2:764416/134‑1 (MQ=255)                    aCGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAAtt                                                                                        >  1:388395/1‑134 (MQ=255)                    aCGCCGGTCTCGATGCCAATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAAtt                                                                                        <  2:305346/134‑1 (MQ=255)                         ggTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCa                                                                                   <  1:858982/134‑1 (MQ=255)                                         cgcTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGt                                                                    <  2:439080/133‑1 (MQ=255)                                           cTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTtgt                                                                 >  1:393605/1‑134 (MQ=255)                                               cacaCGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGgactgggcgccggtgcc                                                                                                                  <  1:340806‑M1/81‑18 (MQ=255)                                               cacaCGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGgactgggcgccggtgcc                                                                                                                  >  2:340806‑M1/1‑64 (MQ=255)                                                  acGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGtt                                                                   >  1:125258/1‑125 (MQ=255)                                                  acGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGtt                                                                   <  2:125258/125‑1 (MQ=255)                                                       caccaGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACg                                                                                 <  1:773711/106‑1 (MQ=255)                                                       caccaGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACg                                                                                 >  2:773711/1‑106 (MQ=255)                                                                    aTCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGgcgagc                                                                                             >  2:1108251/1‑81 (MQ=255)                                                                    aTCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGgcgagc                                                                                             <  1:1108251/81‑1 (MQ=255)                                                                    aTCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTTGTGGTGGCCGTGGAAGCCCAGCTCGGt                                        >  1:137521/1‑134 (MQ=255)                                                                         cGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGACGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTTGTGGTGGCCGTGGAAGCCCAGCTCGGTCTCgg                                   >  2:604143/1‑134 (MQ=255)                                                                                         gcgcCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTTGTGGTGGCCGTGGAAGCCCAGCTCGGTCTCGGGGCGCAGCGCCTGCCg                   <  2:672509/134‑1 (MQ=255)                                                                                             ccAGTCCCGCCGCGGCGGgactgggcgccggtgccggcaatacgccgatggaagtgctggtggccgtgtgcgagcgcatgggcatcgagaccggcgtcgacgtct                                            <  1:618708‑M1/105‑88 (MQ=255)                                                                                                          ggcgggactgggcgccggtgccggcaatacgccgatggaagtgctggtggccgtgtgcgagcgcatgggcatcgagaccggcgtcgacgtctaccgcatcgccgacgtggccgaagacctggtggtgccgatca  <  1:581850‑M1/134‑130 (MQ=255)                                                                                                              |                                                                                                                                  GGCGATGCGGTAGACGTCGACGCCGGTCTCGATGCCCATGCGCTCGCACACGGCCACCAGCACTTCCATCGGCGTATTGCCGGCACCGGCGCCCAGTCCCGCCGCGGCGGCGTCGATGCGGCTGGCGCCGCAGGCGATCGCGGCGAGCGAATTGGCCACGCCCATGGCAAGGTTGTGGTGGCCGTGGAAGCCCAGCTCGGTCTCGGGGCGCAGCGCCTGCCGCACGGCGCCCAGCTTCT  >  AM260480/668018‑668256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.