| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 709929 = | 15 (0.530) | 5 (0.190) | 5/192 | 1.8 | 24.6% | coding (978/1185 nt) | h16_B0635 | transcriptional regulator, LuxR‑family |
| ? | AM260480 | 709973 = | 17 (0.660) | coding (1022/1185 nt) | h16_B0635 | transcriptional regulator, LuxR‑family | |||||
CAGGTGCGCGCGCGCCGTGTTCTTGCTGATGCCGAGCTCGTCCGCAGCCTCATCGAGCGTGAGCCCGTTGGCCAGCTGCAGCGCCAGCTGCGTCTCCGCCGGGGTGAAGTCGAACAGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/710052‑709929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctggcgcTGCAGCTGGCCAACGGGCTCACGCTCGATGAGGCTGCGGACGAGCTCGGCATCAGCAAGAACACGGCGCGCGCGCACCTGCGCGCGATCTTCTCCAAGACCGGCGTGACCCGGCAGGCCACGCTGGTG > AM260480/709973‑710100 CAGGTGCGCGCGCGCCGTGTTCTTGCTGATGCCGAGCTCGTCCGCAGCCTCATCGAGCGTGAGCCCGTTGGCCAGCTGCAGCGCCAGCTGCGTCTCCGCCGGGGTGAAGTCGAACAGCTGGCGCTGCAGCTGGC > 1:206586/1‑134CAGGTGCGCGCGCGCCGTGTTCTTGCTGATGCCGAGCTCGTCCGCAGCCTCATCGAGCGTGAGCCCGTTGGCCAGCTGCAGCGCCAGCTGCGTCTCCGCCGGGGTGAAGTCGAACAGCTGGCGCTGCAGCTGGC < 2:206586/134‑1 AGCCTCATCGAGCGTGAGCCCGTTGGCCAGCTGCAGCGCCAGCTGCGTCTCCGCCGGGGTGAAGTCGAACA > 1:382442/1‑71 AGCCTCATCGAGCGTGAGCCCGTTGGCCAGCTGCAGCGCCAGCTGCGTCTCCGCCGGGGTGAAGTCGAACA < 2:382442/71‑1 CCAGCTGCGTCTCCGCCGGGGTGAAGTCGAACAGCTGGCGCTGCAGCTGGCCAACGGGCTCACGCTCGATGAGGCTGCGGACGAGCTCGGCATCAGCAAGAACACG > 1:1055141/1‑106 CCAGCTGCGTCTCCGCCGGGGTGAAGTCGAACAGCTGGCGCTGCAGCTGGCCAACGGGCTCACGCTCGATGAGGCTGCGGACGAGCTCGGCATCAGCAAGAACACG < 2:1055141/106‑1 ACAGCTGGCGCTGCAGCTGGCCAACGGGCTCACGCTCGATGAGGCTGCGGACGAGCTCGGCATCAGCAAGAACACGGCGCGCGCGCACCTGCGCGCGATCTTCTCCAAGACCGGCGTGACCCGGCAGGCCACGC < 2:1033966/134‑1 AGCTGGCGCTGCAGCTGGCCAACGGGCTCACGCTCGATGAGGCTGCGGACGAGCTC > 1:572827/1‑56 AGCTGGCGCTGCAGCTGGCCAACGGGCTCACGCTCGATGAGGCTGCGGACGAGCTC < 2:572827/56‑1 GCGCTGCAGCTGGCCAACGGGCTCACGCTCGATGAGGCTGCGGACGAGCTCGGCATCAGCAAGAACACGGCGCGCGCGCACCTGCGCGCGATCTTCTCCAAGACCGGCGTGACCCGGCAGGCCACGCTGGTG < 2:265269/132‑1 CAGGTGCGCGCGCGCCGTGTTCTTGCTGATGCCGAGCTCGTCCGCAGCCTCATCGAGCGTGAGCCCGTTGGCCAGCTGCAGCGCCAGCTGCGTCTCCGCCGGGGTGAAGTCGAACAGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/710052‑709929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctggcgcTGCAGCTGGCCAACGGGCTCACGCTCGATGAGGCTGCGGACGAGCTCGGCATCAGCAAGAACACGGCGCGCGCGCACCTGCGCGCGATCTTCTCCAAGACCGGCGTGACCCGGCAGGCCACGCTGGTG > AM260480/709973‑710100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |