| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 1088373 | 15 (0.550) | 4 (0.160) | 4/198 | 2.0 | 24.2% | coding (437/1389 nt) | h16_A0996 | FAD/FMN‑containing dehydrogenase |
| ? | AM260479 | = 1088441 | 11 (0.430) | coding (505/1389 nt) | h16_A0996 | FAD/FMN‑containing dehydrogenase | |||||
CGCCACGCTGCGCGATTTCGACCATGAGGCGCAGGCCTTCGGCCTCGCCACGCCACTGGGCATCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCAAGTTCGGTACCACCGTCGACAACCTGGTATCGGCACAGGTCGTGACCGCCGACGGCAAGCTGGTGCGCGCCAGCGCCGACGAGAACGCCGACCTGTTCTGGGCGCTGCG > AM260479/1088272‑1088505 | cgcCACGCTGCGCGATTTCGACCATGAGGCGCAGGCCTTCGGCCTCGCCACGCCACTGGGCATCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCAAGTTCGGTa < 1:130239/134‑1 (MQ=255) gcgcGATTTCGACCATGAGGCGCAGGCCTTCGGCCTCGCCACGCCACTGGGCATCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCAAGTTCGGTACCACCGt < 1:47094/132‑1 (MQ=255) gcgcGATTTCGACCATGAGGCGCAGGCCTTCGGCCTCGCCACGCCACTGGGCATCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCAAGTTCGGTACCACCGt > 2:47094/1‑132 (MQ=255) aTTTCGACCATGAGGCGCAGGCCTTCGGCCTCGCCACGCCACTGGGCATCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCg > 2:836213/1‑109 (MQ=255) aTTTCGACCATGAGGCGCAGGCCTTCGGCCTCGCCACGCCACTGGGCATCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCg < 1:836213/109‑1 (MQ=255) ccTTCGGCCTCGCCACGCCACTGGGCATCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGtcac > 2:815533‑M1/1‑67 (MQ=255) ccTTCGGCCTCGCCACGCCACTGGGCATCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGtcac < 1:815533‑M1/71‑5 (MQ=255) cTCGCCACGCCACTGGGCATCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCa < 1:1100244/82‑1 (MQ=255) cTCGCCACGCCACTGGGCATCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCa > 2:1100244/1‑82 (MQ=255) tCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCAAGTTCGGTACCACCGTCGa < 2:967812/82‑1 (MQ=255) tCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCAAGTTCGGTACCACCGTCGa < 2:161861/82‑1 (MQ=255) tCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCAAGTTCGGTACCACCGTCGa > 1:967812/1‑82 (MQ=255) tCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCAAGTTCGGTACCACCGTCGa > 1:161861/1‑82 (MQ=255) caccGGCGTGGCCGGGCTGACGCTCGGCGGtcacgacctgtgccga < 1:680551‑M1/46‑17 (MQ=255) caccGGCGTGGCCGGGCTGACGCTCGGCGGtcacgacctgtgccga > 2:680551‑M1/1‑30 (MQ=255) caccGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCg > 1:880442/1‑51 (MQ=255) caccGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCg < 2:880442/51‑1 (MQ=255) ggCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCAAGTTCGGTACCACCGTCGACAACCTGGTATCGGCACAGGTCGTGACCGCCGACGGCAAGCTGGTGCGCGCCAGCGCCGACGAGAACGcc > 1:1080859/1‑133 (MQ=255) ggcggcTTCGGCTGGCTCAGCCGCAAGTTCGGTACCACCGTCGACAACCTGGTATCGGCACAGGTCGTGACCGCCGACGGCAAGCTGGTGCGCGCCAGCGCCGACGAGAACGCCGACCTGTTCTGGGCGCTgcg > 1:255188/1‑134 (MQ=255) | CGCCACGCTGCGCGATTTCGACCATGAGGCGCAGGCCTTCGGCCTCGCCACGCCACTGGGCATCAACTCCACCACCGGCGTGGCCGGGCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGCCGCAAGTTCGGTACCACCGTCGACAACCTGGTATCGGCACAGGTCGTGACCGCCGACGGCAAGCTGGTGCGCGCCAGCGCCGACGAGAACGCCGACCTGTTCTGGGCGCTGCG > AM260479/1088272‑1088505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |