New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 2876814	10 (0.350)	4 (0.150) +GACCGGCTA	4/194	2.1	28.4%	coding (455/501 nt)	ogt	Methylated‑DNA‑[protein]‑cysteine S‑methyltransferase
	?	AM260480	2876848 =	12 (0.420)					coding (421/501 nt)	ogt	Methylated‑DNA‑[protein]‑cysteine S‑methyltransferase

TGCCGCCCGCGCGGGCGGGACTTCCACGGCAATGAACAGGCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGCCGCCGACTGCGCGCGCATGCGTGG  >  AM260480/2876701‑2876937                                                                                                                  |                                                                                                                            tGCCGCCCGCGCGGGCGGGACTTCCACGGCAATGAACAGGCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCg                                                                                                         >  1:852863/1‑134 (MQ=255)                        ccACGGCAATGAACAGGCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGgcgc                                                                                   <  1:803992/133‑1 (MQ=255)                        ccACGGCAATGAACAGGCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGgcgc                                                                                   <  2:303138/133‑1 (MQ=255)                        ccACGGCAATGAACAGGCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCt                                                                                  >  2:1006764/1‑134 (MQ=255)                                       ggCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTgaccggctacgccggcgctgcccagcacgcgatggc                                                                                         <  1:1089187‑M1/112‑37 (MQ=255)                                       ggCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTgaccggctacgccggcgctgcccagcacgcgatggc                                                                                         >  2:1089187‑M1/1‑76 (MQ=255)                                               aTGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGccc                                                                              >  1:470251/1‑115 (MQ=255)                                               aTGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGccc                                                                              <  2:470251/115‑1 (MQ=255)                                                               cgcCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCgg                                           >  2:263801/1‑134 (MQ=255)                                                                             cGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTgaccggctacgccggcgctgcccagcacgcgatggcag                                                                                       <  1:554969‑M1/76‑39 (MQ=255)                                                                             cGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTgaccggctacgccggcgctgcccagcacgcgatggcag                                                                                       >  2:554969‑M1/1‑38 (MQ=255)                                                                                      gACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGCCGCCGa                    <  2:852863/134‑1 (MQ=255)                                                                                                        caAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGCCGCCGACTGCGCGCGCATGCGTgg  <  1:263801/134‑1 (MQ=255)                                                                                                        caAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGCCGCCGACTGCGCGCGCATGCGTgg  <  2:1104168/134‑1 (MQ=255)                                                                                                                  |                                                                                                                            TGCCGCCCGCGCGGGCGGGACTTCCACGGCAATGAACAGGCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGCCGCCGACTGCGCGCGCATGCGTGG  >  AM260480/2876701‑2876937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.