| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 2876814 | 10 (0.350) | 4 (0.150) +GACCGGCTA |
4/194 | 2.1 | 28.4% | coding (455/501 nt) | ogt | Methylated‑DNA‑[protein]‑cysteine S‑methyltransferase |
| ? | AM260480 | 2876848 = | 12 (0.420) | coding (421/501 nt) | ogt | Methylated‑DNA‑[protein]‑cysteine S‑methyltransferase | |||||
CCACGGCAATGAACAGGCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGCCGCCGACTGCGCGCGCATGCGTGGGCGGCAGGCCCAGGGTGCGGGCCAGTTCGCCGTAC > AM260480/2876724‑2876972 | ccACGGCAATGAACAGGCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGgcgc < 1:803992/133‑1 (MQ=255)ccACGGCAATGAACAGGCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGgcgc < 2:303138/133‑1 (MQ=255)ccACGGCAATGAACAGGCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCt > 2:1006764/1‑134 (MQ=255) aTGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGccc > 1:470251/1‑115 (MQ=255) aTGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGccc < 2:470251/115‑1 (MQ=255) ggcgcggcatggcagcgcggccagcgccatcagccgggcgtggtgccgacgccttcgcgctgcagcaaggcgcgctgaccggctaCGCCGGCGCTGCCCAGCACGCGATGGc < 1:1089187‑M2/27‑1 (MQ=255) ggcgcggcatggcagcgcggccagcgccatcagccgggcgtggtgccgacgccttcgcgctgcagcaaggcgcgctgaccggctaCGCCGGCGCTGCCCAGCACGCGATGGc > 2:1089187‑M2/86‑112 (MQ=255) cgcCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCgg > 2:263801/1‑134 (MQ=255) gACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGCCGCCGa < 2:852863/134‑1 (MQ=255) cgtggtgccgacgccttcgcgctgcagcaaggcgcgctgaccggctaCGCCGGCGCTGCCCAGCACGCGATGGCAg < 1:554969‑M2/29‑1 (MQ=255) cgtggtgccgacgccttcgcgctgcagcaaggcgcgctgaccggctaCGCCGGCGCTGCCCAGCACGCGATGGCAg > 2:554969‑M2/48‑76 (MQ=255) caAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGCCGCCGACTGCGCGCGCATGCGTgg < 1:263801/134‑1 (MQ=255) caAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGCCGCCGACTGCGCGCGCATGCGTgg < 2:1104168/134‑1 (MQ=255) tggTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGCCGCCGACTGCGCGCGCATGCGTGGGCGGCAGGCCCAGGGTGCGGGCCAGTTCGCCGTac > 2:1083665/2‑134 (MQ=255) gTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGccgccg < 1:71448/78‑1 (MQ=255) gTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGccgccg > 2:71448/1‑78 (MQ=255) | CCACGGCAATGAACAGGCGCGGCATGGCAGCGCGGCCAGCGCCATCAGCCGGGCGTGGTGCCGACGCCTTCGCGCTGCAGCAAGGCGCGCTTGCGCTCGATGCCGCCGGCGTAGCCGGTCAGCGCGCCGGCGCTGCCCAGCACGCGATGGCAGGGCACGATCACCGACAGCGGGTTGCGTCCCACCGCGCCGCCGACTGCGCGCGCATGCGTGGGCGGCAGGCCCAGGGTGCGGGCCAGTTCGCCGTAC > AM260480/2876724‑2876972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |