| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 3703449 = | 19 (0.700) | 7 (0.280) | 7/196 | 1.4 | 27.2% | coding (417/540 nt) | h16_A3429 | Hypothetical protein |
| ? | AM260479 | 3703537 = | 20 (0.800) | coding (505/540 nt) | h16_A3429 | Hypothetical protein | |||||
CGCGGCGGGGCTGCGGCGTTCGCGGCTGATCGCGGTGCAGTCGGCGGCGCCGTGGTGGCACAGGCTCGGATACGTCCCGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTGCGCCAGGCGGGCTTCTTGTTCCTGCCGGGGTGAATCAGCGCGG > AM260479/3703404‑3703657 | cgcgGCGGGGCTGCGGCGTTCGCGGCTGATCGCGGTGCAGTCGGCGGCGCCGTGGTGGCACAGGCTCGGATACGTCCCGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCa < 2:35301/134‑1 (MQ=255) cggcggGGCTGCGGCGTTCGCGGCTGATCGCGGTGCAGTCGGCGGCGCCGTGGTGGCACAGGCTCGGATACGTCCCGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGt < 2:28147/134‑1 (MQ=255) cggcggGGCTGCGGCGTTCGCGGCTGATCGCGGTGCAGTCGGCGGCGCCGTGGTGGCACAGGCTCGGATACGTCCCGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGt < 2:205946/134‑1 (MQ=255) gcggGGCTGCGGCGTTCGCGGCTGATCGCGGTGCAGTCGGCGGCGCCGTGGTGGCACAGGCTCGGATACGTCCCGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGc < 2:112173/134‑1 (MQ=255) gcggGGCTGCGGCGTTCGCGGCTGATCGCGGTGCAGTCGGCGGCGCCGTGGTGGCACAGGCTCGGATACGTCCCGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGc < 2:1035656/134‑1 (MQ=255) gtcggccagcgtgcgctccatcagcaccgcactGGCGCCGTGGTGGCACAGGCTCGGATACGTCCCGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGa < 2:39184‑M1/101‑1 (MQ=255) gCTGATCGCGGTGCAGTCGGCGGCGCCGTGGTGGCACAGGCTCGGATACGTCCCGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGc < 2:1094629/134‑1 (MQ=255) tcagcaccgcactggcgccgtagctggccagcttgggcgcatgggcggtggccgtgtgcgccgccaccgggacgtatccgagcctgtgccaccacggcgccAGTGCGGTGCTGATGGAGCGCACGCTGGCCGAc < 2:39184‑M2/33‑1 (MQ=255) ggATACGTCCCGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGc < 1:212840/91‑1 (MQ=255) ggATACGTCCCGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGc > 2:212840/1‑91 (MQ=255) cGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTg > 2:405638/1‑134 (MQ=255) gTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCgg > 1:192840/1‑102 (MQ=255) gTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCgg < 2:192840/102‑1 (MQ=255) gTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTgcg > 2:323746/1‑134 (MQ=255) cggcgCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAgcgc < 1:467143/90‑1 (MQ=255) cggcgCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAgcgc > 2:467143/1‑90 (MQ=255) cggcgCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTGCGCCAg > 2:671277/1‑134 (MQ=255) acacGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTGCGCCAGGCGGGc > 2:506622/1‑134 (MQ=255) agcACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTGCGCCAGGCGGGcttctt > 2:652477/3‑134 (MQ=255) caccgggacgtatccgagcctgtgccaccacggcgccAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTGCGCCAGGCGGGCTTCTTGt > 1:793378‑M2/38‑134 (MQ=255) tccgagcctgtgccaccacggcgccAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTGCGCCAGGCGGGCTTCTTGTTCCTGCCGGGGt < 2:793378‑M2/109‑1 (MQ=255) cccAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTGCGCCAGGCGGGCTTCTTGTTCCTGCCGGGGt > 1:714226/1‑133 (MQ=255) cAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTGCGCCAGGCGGGCTTCTTGTTCCTGCCGGGGTGaa < 1:405638/134‑1 (MQ=255) agcctgtgccaccacggcgccAGTGCGGTGCTGATGGAg > 2:845219‑M2/22‑39 (MQ=255) agcctgtgccaccacggcgccAGTGCGGTGCTGATGGAg < 1:845219‑M2/18‑1 (MQ=255) cAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTGCGCCAGGCGGGCTTCTTGTTCCTGCCGGGGTGAATCAGCGCgg < 1:671277/134‑1 (MQ=255) accacggcgccAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGgacga < 1:1019093‑M2/59‑1 (MQ=255) accacggcgccAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGgacga > 2:1019093‑M2/12‑70 (MQ=255) cAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCgg > 2:54651‑M2/2‑49 (MQ=255) cAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCgg < 1:54651‑M2/48‑1 (MQ=255) | CGCGGCGGGGCTGCGGCGTTCGCGGCTGATCGCGGTGCAGTCGGCGGCGCCGTGGTGGCACAGGCTCGGATACGTCCCGGTGGCGGCGCACACGGCCACCGCCCATGCGCCCAAGCTGGCCAGCTACGGCGCCAGTGCGGTGCTGATGGAGCGCACGCTGGCCGACTGAGCGCTGCGCCGGCGCGAGGACGACAAAAAGCCCGCCGGCTTGCGCCAGGCGGGCTTCTTGTTCCTGCCGGGGTGAATCAGCGCGG > AM260479/3703404‑3703657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |