New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	2609256 =	14 (0.510)	6 (0.240)	4/198	2.0	28.6%	coding (206/852 nt)	h16_A2396	protein of unknown function
	?	AM260479	2609283 =	17 (0.670)					coding (233/852 nt)	h16_A2396	protein of unknown function

CTGCACGGTCCGGCGGATGATGAACTCGCCCGGGTAGAGCACGATGCCGTGCCAGCCCCGGTACCAAGGCAGCCCCAGCTTCAGGATCGGCACGCAGGCCTGCACGGCAACGCTGGCCACCATGTCGTCGGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AM260479/2609392‑2609256 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcgTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGCTCTACCCGGGCGAGTTCATCATCCGCCGGACCGTGCAGGACGAGATCGGCCTAGTGCACG  >  AM260479/2609283‑2609414                                                                                                                                                                                                                                                                               CTGCACGGTCCGGCGGATGATGAACTCGCCCGGGTAGAGCACGATGCCGTGCCAGCCCCGGTACC‑AGGCAGCCCCAGCTTCAGGATCGGCACGCAGGCCTGCACGGCAACGCTGGCCACCATGTCGTCGGCCA                                                                                                                                         <  2:826509/133‑1    CACGGTCCGGCGGATGATGAACTCGCCCGGGTAGAGCACGATGCCGTGCCAGCCCCGGTACCAAGGCAGCCCCAGCTTCAGGATCGGCACGCAGGCCTGCACGGCAACGCTGGCCACCATGTCGTCGGCCAG                                                                                                                                        <  1:631259/132‑1                                     GAGCACGATGCCGTGCCAGCCCCGGTACCAAGGCAGCCCCAGCTTCAGGATCGGCACGCAGGCCTGCGCGGCAACGCTGGCCACCATGTCGTCGGCCAGCGTTGGCGTGCAGGCCTGCGTGCCGATCCTGAAGC                                                                                                     >  2:693952/1‑134                                     GAGCACGATGCCGTGCCAGCCCCGGTACCAAGGCAGCCCCAGCTTCAGGATCGGCACGCAGGCCTGCACGGCAACGCTGGCCACCATGTCGTCGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGC                                                                                                     >  2:1128265/1‑134                                       GCACGATGCCGTGCCAGCCCCGGTACCAAGGCAGCCCCAGCTTCAGGATCGGCACGCAGGCCTGCACGGCAACGCTGGCCACCATGTCGTCGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTG                                                                                                   <  1:1128265/134‑1                                       GCACGATGCCGTGCCAGCCCCGGTACCAAGGCAGCCCCAGCTTCAGGATCGGCACGCAGGACTGCACGGCAACGCTGGCCACCATGTCGTCGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTG                                                                                                   <  1:693952/134‑1                                                           CGGTACCAAGGCAGCCCCAGCTTCAGGATCGGCACGCAGGCCTGCACGGCAACGCTGGCCACCATGTCGTCGGCCAGCGTTGCCGTGCAGGCCTGCGTGCC                                                                                                                >  1:716417/1‑101                                                           CGGTACCAAGGCAGCCCCAGCTTCAGGATCGGCACGCAGGCCTGCACGGCAACGCTGGCCACCATGTCGTCGGCCAGCGTTGCCGTGCAGGCCTGCGTGCC                                                                                                                <  2:716417/101‑1                                                                                                                                        CGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGCTCTACCCGGGCGAGTTCATCATCCGCCGGACCGTGCAGGACGAGATCGGCCTAGTGCACG  >  2:637997/1‑134                                                                                                                                                                                                                                                                               CTGCACGGTCCGGCGGATGATGAACTCGCCCGGGTAGAGCACGATGCCGTGCCAGCCCCGGTACCAAGGCAGCCCCAGCTTCAGGATCGGCACGCAGGCCTGCACGGCAACGCTGGCCACCATGTCGTCGGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AM260479/2609392‑2609256 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcgTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGCTCTACCCGGGCGAGTTCATCATCCGCCGGACCGTGCAGGACGAGATCGGCCTAGTGCACG  >  AM260479/2609283‑2609414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.