New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	2609256 =	14 (0.510)	6 (0.240)	4/198	2.0	28.6%	coding (206/852 nt)	h16_A2396	protein of unknown function
	?	AM260479	2609283 =	17 (0.670)					coding (233/852 nt)	h16_A2396	protein of unknown function

ATGCGCTGTGGGCGCGCACGGTCGCCACGCTGCCGTTCGTGCAGCGCTACGGCAGCGAAGACCTGGCGGCGCTGCGCGAACTGGCCACGCTGTTCATCGCCGACAAGGAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGCTCTACCCGGGCGAGTTCATCATCCGCCGGACC  >  AM260479/2609124‑2609386                                                                                                                                     |                                                                                                                                   cgtgcactaggccgatctcgtcctgcacggtccggcggatgatgaactcgcccgggtagagcacgatgccgtgccagccccggtaccaaggcagccccagcttcaggatcggcacgcaggcctgcacggcaaCg                                                                                                                                   >  2:637997‑M1/133‑134 (MQ=255)  tGCGCTGTGGGCGCGCACGGTCGCCACGCTGCCGTTCGTGCAGCGCTACGGCAGCGAAGACCTGGCGGCGCTGCGCGAACTGGCCACGCTGTTCATCGCCGACAAGGAATACTCCACCGCGCACGACCTGCCGc                                                                                                                                  <  1:61653/134‑1 (MQ=255)                                             cgcTACGGCAGCGAAGACCTGGCGGCGCTGCGCGAACTGGCCACGCTGTTCATCGCCGACAAGGAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGt                                                                                       >  2:716057/1‑134 (MQ=255)                                                   ggCAGCGAAGACCTGGCGGCGCTGCGCGAACTGGCCACGCTGTTCATCGCCGACAAGGAAGACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGAt                                                                                 >  2:1055903/1‑134 (MQ=255)                                                        cGAAGACCTGGCGGCGCTGCGCGAACTGGCCACGCTGTTCATCGCCGACAAGGAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGa                                                                            <  1:1055903/134‑1 (MQ=255)                                                             aCCTGGCGGCGCTGCGCGAACTGGCCACGCTGTTCATCGCCGACAAGGAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTg                                                                       <  1:716057/134‑1 (MQ=255)                                                                  gcggcgCTGCGCGAACTGGCCACGCTGTTCATCGCCGACAAGGAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCt                                                                  <  1:313834/134‑1 (MQ=255)                                                                     gcgcTGCGCGAACTGGCCACGCTGTTCATCGCCGACAAGGAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGcc                                                               >  1:589123/1‑134 (MQ=255)                                                                                         gCTGTTCATCGCCGACAAGGAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCt                                                 >  1:904497/1‑128 (MQ=255)                                                                                         gCTGTTCATCGCCGACAAGGAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCt                                                 <  2:904497/128‑1 (MQ=255)                                                                                                  cagcttcaggatcggcacgcaggcctgcacggcaaCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGTCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGc                                  <  1:693952‑M1/99‑1 (MQ=255)                                                                                                  cagcttcaggatcggcacgcaggcctgcacggcaaCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGc                                  <  1:1128265‑M1/99‑1 (MQ=255)                                                                                                    gcttcaggatcggcacgcaggcctgcacggcaaCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGctc                                >  2:1128265‑M1/34‑134 (MQ=255)                                                                                                    gcttcaggatcggcacgcaggcctgcacgccaaCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGCGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGctc                                >  2:693952‑M1/34‑134 (MQ=255)                                                                                                      gACAAGGAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGTCTGCGTGCCGa                                                                                  >  2:1080051/1‑82 (MQ=255)                                                                                                      gACAAGGAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGTCTGCGTGCCGa                                                                                  <  1:1080051/82‑1 (MQ=255)                                                                                                           ggAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGCTCTACCCgg                         >  1:144129/1‑134 (MQ=255)                                                                                                               ggcacgcaggcctgcacggcaaCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCg                                                      >  1:716417‑M1/23‑101 (MQ=255)                                                                                                               ggcacgcaggcctgcacggcaaCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCg                                                      <  2:716417‑M1/79‑1 (MQ=255)                                                                                                                            aCGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGCTCTACCCGGGCGAGTTCATCATccgc        <  2:144129/134‑1 (MQ=255)                                                                                                                                  tGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGCTCTACCCGGGCGAGTTCATCATCCGCCGGAcc  >  2:753731/1‑134 (MQ=255)                                                                                                                                     |                                                                                                                                   ATGCGCTGTGGGCGCGCACGGTCGCCACGCTGCCGTTCGTGCAGCGCTACGGCAGCGAAGACCTGGCGGCGCTGCGCGAACTGGCCACGCTGTTCATCGCCGACAAGGAATACTCCACCGCGCACGACCTGCCGCTGGCCGACGACATGGTGGCCAGCGTTGCCGTGCAGGCCTGCGTGCCGATCCTGAAGCTGGGGCTGCCTTGGTACCGGGGCTGGCACGGCATCGTGCTCTACCCGGGCGAGTTCATCATCCGCCGGACC  >  AM260479/2609124‑2609386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.