New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 2712325	25 (0.910)	6 (0.240)	6/196	1.5	20.0%	coding (1570/2022 nt)	h16_A2497	signal transduction protein
	?	AM260479	= 2712337	25 (1.000)					coding (1582/2022 nt)	h16_A2497	signal transduction protein

TGTTCGGGCGCAATGTCACCCATGAGCGCGAAAAACTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260479/2712188‑2712325 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagcgAGCGCCCGTCGGCGCTGGCGCGGGCCATGCATTCGGCCAGGCGCCGGTCGAAACCCTTGCGGTTGAGCAGGCCGGTGAGGTAGTCGGAGATGGTCTGTGCTTCCAGGCTGCGCAGTTTTTCGCGCTCAT  <  AM260479/2712337‑2712209                                                                                                                                                                                                                                                                             TGTTCGGGCGCAATGTCACCCATGAGCGCGAAAAACTGCGCAGCGTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGC                                                                                                                                        >  2:785158/1‑133                            GCGAAAAACTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGAGCGCCCGTCGGCGCTGGCGC                                                                                                              <  1:177945/132‑1                            GCGAAAAACTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGAGCGCCCGTCGGCGCTGGCGC                                                                                                              >  2:177945/1‑132                                                                                                GGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGAGCGCCCGTCGGCGCTGGCGCGGGCCATGCATTCGGCCAGGCGCCGGTCGAAACCCTTGCGGTTGAGCAGGCCGGTGAGGTAGTCGGAGAT                                        >  2:333522/1‑134                                                                                                  TTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGAGCGCCCGTCGGCGCTGGC                                                                                                                <  1:773743/60‑1                                                                                                  TTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGAGCGCCCGTCGGCGCTGGC                                                                                                                >  2:773743/1‑60                                                                                                                  GCCGAATGCATGGCCCGCGCCAGCGAGCGCCCGTCGGCGCTGGCGCGGGCCATGCATTCGGCCAGGCGCCGGTCGAAACCCTTGCTGTTGAGCAGGCCGGTGAGGTAGTCGGAGATGGTCTGTGCTTCCAGGCT                      <  1:333522/134‑1                                                                                                                                  GCGCCAGCGAGCGCCCGTCGGCGCTGGCGCGGGCCATGCATTCGGCCAGGCGCCGGTCGAAACCCTTGCGGTTGAGCAGGCCGGTGAGGTAGTC                                              >  1:405037/1‑94                                                                                                                                  GCGCCAGCGAGCGCCCGTCGGCGCTGGCGCGGGCCATGCATTCGGCCAGGCGCCGGTCGAAACCCTTGCGGTTGAGCAGGCCGGTGAGGTAGTC                                              <  2:405037/94‑1                                                                                                                                      CAGCGAGCGCCCGTCGGCGCTGGCGCGGGCCATGCATTCGGCCAGGCGCCGGTCGAAACCCTTGCGGTTGAGCAGGCCGGTGAGGTAGTCGGAGATGGTCTGTGCTTCCAGGCTGCGCAGTTTTTCGCGCTCAT  <  2:319481/134‑1                                                                                                                                       AGCGAGCGCCCGTCGGCGCTGGCGCGGGCCATGCATTCGGCCAGGCGCCGGTCGAAACCCTTGCGGTTGAGCAGGCCG                                                         <  1:457560/78‑1                                                                                                                                       AGCGAGCGCCCGTCGGCGCTGGCGCGGGCCATGCATTCGGCCAGGCGCCGGTCGAAACCCTTGCGGTTGAGCAGGCCG                                                         >  2:457560/1‑78                                                                                                                                                                                                                                                                             TGTTCGGGCGCAATGTCACCCATGAGCGCGAAAAACTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260479/2712188‑2712325 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagcgAGCGCCCGTCGGCGCTGGCGCGGGCCATGCATTCGGCCAGGCGCCGGTCGAAACCCTTGCGGTTGAGCAGGCCGGTGAGGTAGTCGGAGATGGTCTGTGCTTCCAGGCTGCGCAGTTTTTCGCGCTCAT  <  AM260479/2712337‑2712209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.