| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 2712325 | 25 (0.910) | 6 (0.240) | 6/196 | 1.5 | 20.0% | coding (1570/2022 nt) | h16_A2497 | signal transduction protein |
| ? | AM260479 | = 2712337 | 25 (1.000) | coding (1582/2022 nt) | h16_A2497 | signal transduction protein | |||||
GCAATGTCACCCATGAGCGCGAAAAACTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCAACGACAGCTTTGGCCATCCGGTGGGCGACCAGTTGCTGGTCGCCTTTGCGCAGCGGCTGCGCGCCTGCGTGC > AM260479/2712197‑2712454 | gcAATGTCACCCATGAGCGCGAAAAACTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGAc > 2:874491/1‑134 (MQ=255) cAATGTCACCCATGAGCGCGAAAAACTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACg < 2:336914/134‑1 (MQ=255) aTGAGCGCGAAAAACTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTcgctg < 2:319481‑M2/134‑6 (MQ=255) gcgAAAAACTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGagcgcccgtcggcgctggcgc < 1:177945‑M1/132‑22 (MQ=255) gcgAAAAACTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGagcgcccgtcggcgctggcgc > 2:177945‑M1/1‑111 (MQ=255) aCTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCtgg < 1:874491/134‑1 (MQ=255) cgcAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCtggtg < 1:319481/132‑1 (MQ=255) aGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACAGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTcgctggcgcgggccatgcattcggc < 1:333522‑M2/134‑26 (MQ=255) aGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAg < 2:772936/134‑1 (MQ=255) aTCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTcgctggcgcgggccatgcattcggccaggcgccggtcgaaacc > 2:333522‑M2/1‑91 (MQ=255) tctcCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGt > 1:689148/1‑133 (MQ=255) cGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCa < 2:689148/131‑1 (MQ=255) cGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCa < 1:977819/131‑1 (MQ=255) gACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTcgctggcgc < 2:405037‑M2/94‑10 (MQ=255) gACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTcgctggcgc > 1:405037‑M2/1‑85 (MQ=255) aCCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCt < 1:753280/101‑1 (MQ=255) aCCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCt > 2:753280/1‑101 (MQ=255) aCCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCa < 1:536084/121‑1 (MQ=255) aCCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCa > 2:536084/1‑121 (MQ=255) ccGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGAcc < 1:352753/99‑1 (MQ=255) ccGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGAcc > 2:352753/1‑99 (MQ=255) cGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTcgct > 2:457560‑M2/1‑74 (MQ=255) cGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTcgct < 1:457560‑M2/78‑5 (MQ=255) ccTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCAACGACAGCTTTGGCCATc < 1:805067/134‑1 (MQ=255) aCCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCAACGACAGCTTTGGCCATCCGGTGGGc > 1:807512/1‑134 (MQ=255) ggTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGagcgcccgtcggcgctggcgcgggccatgcattcggccaggcgccggtcgaaacccttgcggttgagcaggccggtgaggtagtcggagat > 2:333522‑M1/1‑43 (MQ=255) ggTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCAACGACAGCTTTGGCCATCCGGTGGGCGACCAGtt > 2:651045/1‑134 (MQ=255) tttCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGagcgcccgtcggcgctggc > 2:773743‑M1/1‑41 (MQ=255) tttCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGagcgcccgtcggcgctggc < 1:773743‑M1/60‑20 (MQ=255) tttCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCAACGACAGCTTTGGCCATCCGGTGGGCGACCAGTTGc > 2:27395/1‑134 (MQ=255) cTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCt > 1:508991/1‑65 (MQ=255) cTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCt < 2:508991/65‑1 (MQ=255) gCCGAATGCATGGCCCGCGCCAGCGagcgcccgtcggcgctggcgcgggccatgcattcggccaggcgccggtcgaaacccttgctgttgagcaggccggtgaggtagtcggagatggtctgtgcttccaggct < 1:333522‑M1/134‑110 (MQ=255) aaTGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCAACGACAGCTTTGGCCATCCGGTGGGCGACCAGTTGCTGGTCGCCTTTGCGCAGCgg < 1:220913/134‑1 (MQ=255) cATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGgacgac > 1:182746/1‑61 (MQ=255) cATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGgacgac < 2:182746/61‑1 (MQ=255) cATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCAACGACAGCTTTGGCCATCCGGTGGGCGACCAGTTGCTGGTCGCCTTTGCGCAGCGGCTgc > 2:752440/1‑134 (MQ=255) cATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCAACGACAGCTTTGGCCATCCGGTGGGCGACCAGTTGCTGGTCGCCTTTGCGCAGCGGCTgc > 2:208314/1‑134 (MQ=255) gcgcCAGCGagcgcccgtcggcgctggcgcgggccatgcattcggccaggcgccggtcgaaacccttgcggttgagcaggccggtgaggtagtc < 2:405037‑M1/94‑86 (MQ=255) gcgcCAGCGagcgcccgtcggcgctggcgcgggccatgcattcggccaggcgccggtcgaaacccttgcggttgagcaggccggtgaggtagtc > 1:405037‑M1/1‑9 (MQ=255) gcgcCAGCGCCGACGGGCGCTcgctggcgcgggccatgcattcggccaggcgccggtcgaaacccttgcggttgagcaggccggtgaggtagtcggagatggtctgtgcttccaggctgcgcagtttttcgc > 2:177945‑M2/1‑21 (MQ=255) gcgcCAGCGCCGACGGGCGCTcgctggcgcgggccatgcattcggccaggcgccggtcgaaacccttgcggttgagcaggccggtgaggtagtcggagatggtctgtgcttccaggctgcgcagtttttcgc < 1:177945‑M2/132‑112 (MQ=255) gcCAGCGCCGACGGGCGCTcgctggcgcgggccatgcattcggccaggcgccggtcgaaa < 1:773743‑M2/60‑42 (MQ=255) gcCAGCGCCGACGGGCGCTcgctggcgcgggccatgcattcggccaggcgccggtcgaaa > 2:773743‑M2/1‑19 (MQ=255) cAGCGagcgcccgtcggcgctggcgcgggccatgcattcggccaggcgccggtcgaaacccttgcggttgagcaggccggtgaggtagtcggagatggtctgtgcttccaggctgcgcagtttttcgcgctcat < 2:319481‑M1/134‑130 (MQ=255) agcgagcgcccgtcggcgctggcgcgggccatgcattcggccaggcgccggtcgaaacccttgcggttgagcaggccg > 2:457560‑M1/1‑4 (MQ=255) agcgagcgcccgtcggcgctggcgcgggccatgcattcggccaggcgccggtcgaaacccttgcggttgagcaggccg < 1:457560‑M1/78‑75 (MQ=255) | GCAATGTCACCCATGAGCGCGAAAAACTGCGCAGCCTGGAAGCACAGACCATCTCCGACTACCTCACCGGCCTGCTCAACCGCAAGGGTTTCGACCGGCGCCTGGCCGAATGCATGGCCCGCGCCAGCGCCGACGGGCGCTCGCTGGCGCTGCTGCTGGTGGACCTGGACGACTTCAAGGGCGTCAACGACAGCTTTGGCCATCCGGTGGGCGACCAGTTGCTGGTCGCCTTTGCGCAGCGGCTGCGCGCCTGCGTGC > AM260479/2712197‑2712454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |