| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 254635 | 16 (0.580) | 4 (0.160) | 3/194 | 2.3 | 20.3% | coding (306/453 nt) | h16_A0241 | Uncharacterized protein, possibly involved in aromatic compounds catabolism |
| ? | AM260479 | = 254653 | 17 (0.690) | coding (324/453 nt) | h16_A0241 | Uncharacterized protein, possibly involved in aromatic compounds catabolism | |||||
CGATGTGCATGGCGGCACGCTGATGGCGACGCTGGACTTCACCCTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGGTGTGCGTGGCGCGGGCCGCGTTCAAGCTGGTGCCGCTGTCC > AM260479/254506‑254767 | cgATGTGCATGGCGGCACGCTGATGGCGACGCTGGACTTCACCCTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCgcggcg < 1:233543/134‑1 (MQ=255) aCGCTGATGGCGACGCTGGACTTCACCCTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGgc < 2:16705‑M2/134‑3 (MQ=255) aCGCTGATGGCGACGCTGGACTTCACCCTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGgc < 2:1074340‑M2/134‑3 (MQ=255) cACCCTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGgcgc < 2:499281/132‑1 (MQ=255) gcgcgcTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCgcattgcatt < 2:59582/128‑1 (MQ=255) gcgcgcTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCgcattgcatt > 1:59582/1‑128 (MQ=255) cgcgcTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATTGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGgcgcgctgccgccaggaaatgcgtggacatgtcgatcgtgat > 1:1074340‑M2/1‑92 (MQ=255) cgcgcTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGgcgcgctgccgccaggaaatgcgtggacatgtcgatcgtgat > 1:16705‑M2/1‑92 (MQ=255) aaaCCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCctccagcgtcagctcgccg > 1:623002‑M1/1‑53 (MQ=255) aaaCCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCctccagcgtcagctcgccg < 2:623002‑M1/72‑20 (MQ=255) aaaCCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTgcg < 1:511624/111‑1 (MQ=255) aaaCCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTgcg > 2:511624/1‑111 (MQ=255) aaaCCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGcc > 1:239916/1‑134 (MQ=255) gATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCgtgg > 2:72850/1‑134 (MQ=255) aTCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCctccagcgtcagctcgccgcgcgctgccgccaggaaatgcgtggacatgtcgatcgtgatcacgccggtttccagcggcgcatgcgagcgcg > 1:16705‑M1/1‑42 (MQ=255) aTCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCctccagcgtcagctcgccgcgcgctgccgccaggaaatgcgtggacatgtcaatcgtgatcacgccggtttccagcggcgcatgcgagcgcg > 1:1074340‑M1/1‑42 (MQ=255) cACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCgg > 2:170388/1‑123 (MQ=255) cACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCgg < 1:170388/123‑1 (MQ=255) tttCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCgcat > 1:656176/1‑66 (MQ=255) tttCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCgcat < 2:656176/66‑1 (MQ=255) ggcggcAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTgcgag > 1:470435/1‑73 (MQ=255) ggcggcAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTgcgag < 2:470435/73‑1 (MQ=255) gacggcAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGGTGTGCGTGGCGCGGGCCGCGTTCAAGCTgg > 2:978181/3‑134 (MQ=255) gcgcgGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGGTGTGCGTGGCGCGGGCCGCGTTCAAGCTGGTGCCGCTGt > 2:514002/1‑134 (MQ=255) gcctccagcgtcagctcgccgcgcgctgccgccaggaaatgcgtggacatgtcgatcgtgatcacgccggtttccagcggcgcatgcgagcgcgcggcgccgctcagggtgaagtccagcgtcgccatcagcgt < 2:16705‑M1/134‑133 (MQ=255) gcctccagcgtcagctcgccgcgcgctgccgccaggaaatgcgtggacatgtcgatcgtgatcacgccggtttccagcggcgcatgcgagcgcgcggcgccgctcagggtgaagtccagcgtcgccatcagcgt < 2:1074340‑M1/134‑133 (MQ=255) cggcgAGCTGACGCTGGAGgcgcgctgccgccaggaaatgcgtggacatgtcgatcgtgatcacgccggttt < 2:623002‑M2/72‑54 (MQ=255) cggcgAGCTGACGCTGGAGgcgcgctgccgccaggaaatgcgtggacatgtcgatcgtgatcacgccggttt > 1:623002‑M2/1‑19 (MQ=255) | CGATGTGCATGGCGGCACGCTGATGGCGACGCTGGACTTCACCCTGAGCGGCGCCGCGCGCTCGCATGCGCCGCTGGAAACCGGCGTGATCACGATCGACATGTCCACGCATTTCCTGGCGGCAGCGCGCGGCGAGCTGACGCTGGAGGCGCGCTGCCTGCGCCGCGGCGCGCGCATTGCATTCTGCGAGGGCGAGGTCAAGGATGCTGCCGGCACCGTGGTGTGCGTGGCGCGGGCCGCGTTCAAGCTGGTGCCGCTGTCC > AM260479/254506‑254767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |