| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 3618302 = | 20 (0.730) | 6 (0.240) | 4/196 | 2.0 | 26.5% | intergenic (+7/+418) | ubiX1/h16_A3345 | 3‑Polyprenyl‑4‑hydroxybenzoate decarboxylase/aldehyde dehydrogenase family |
| ? | AM260479 | 3618333 = | 15 (0.600) | intergenic (+38/+387) | ubiX1/h16_A3345 | 3‑Polyprenyl‑4‑hydroxybenzoate decarboxylase/aldehyde dehydrogenase family | |||||
GAACTGGTCGACCATACGGTCGGGCGCGTGCTCGACCTGGTGGATTTGCCGGAGATCGGCCAGACGCTCGCGCCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAGCGGCGGTAGCCCCGGCCATAGTAGCCATGGCCATAGTAGCCGCCA > AM260479/3618173‑3618416 | cgcgccggtggtggtggcaccgcggccgtactactacggcggctatggcggctactatggccatggctactatggccggggctaccgccgctggtaatgagcgcggttggcacgacaatgcgcgaggatGCCgg > 2:790836‑M1/130‑134 (MQ=255) tCGACCATACGGTCGGGCGCGTGCTCGACCTGGTGGATTTGCCGGAGATCGGCCAGACGCTCGCGCCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGcggccgg > 2:725111/1‑127 (MQ=255) tCGACCATACGGTCGGGCGCGTGCTCGACCTGGTGGATTTGCCGGAGATCGGCCAGACGCTCGCGCCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGcggccgg < 1:725111/127‑1 (MQ=255) tACGGTCGGGCGCGTGCTCGACCTGGTGGATTTGCCGGAGATCGGCCAGACGCTCGCGCCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCctctct < 2:365529/134‑1 (MQ=255) tCGACCTGGTGGATTTGCCGGAGATCGGCCAGACGCTCGCGCCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCt > 2:211555/1‑134 (MQ=255) gACCTGGTGGATTTGCCGGAGATCGGCCAGACGCTCGCGCCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTcg > 2:655885/1‑134 (MQ=255) tggtggATTTGCCGGAGATCGGCCAGACGCTCGCGCCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTcg > 1:101955/1‑130 (MQ=255) tggtggATTTGCCGGAGATCGGCCAGACGCTCGCGCCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTcg < 2:101955/130‑1 (MQ=255) ggAGATCGGCCAGACGCTCGCGCCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAAc < 2:446728/134‑1 (MQ=255) catggctactatggccggggctaccgccgctggtaatgagcgcggttggcacgacaatgcgcgaggatGCCgg < 1:1017672‑M1/5‑1 (MQ=255) catggctactatggccggggctaccgccgctggtaatgagcgcggttggcacgacaatgcgcgaggatGCCgg > 2:1017672‑M1/69‑73 (MQ=255) cTCGCGCCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAgc > 1:618875/1‑134 (MQ=255) gcgcCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAgcggc < 2:618875/134‑1 (MQ=255) gcCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAGcggcgg < 1:698706/134‑1 (MQ=255) cccAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAGCGGCGGt < 1:756918/134‑1 (MQ=255) ccAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAGCGGCGGTa < 1:655885/134‑1 (MQ=255) cTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAGCGGCGGTAGCCCCGGCCAtagt < 2:263196/134‑1 (MQ=255) cTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAGCGGCGGTAGCCCCGGCCAtagt < 2:352878/134‑1 (MQ=255) cTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAGCGGCGGTAGCCCCGGCCAtagt < 1:239245/134‑1 (MQ=255) cTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAGCGGCGGTAGCCCCGGCCAtagt < 1:47457/134‑1 (MQ=255) taatgagcgcggttggcacgacaatgcgcgaggatGCCGGCGCGCAGCCTCTCTCTAcgcg < 2:365251‑M1/26‑1 (MQ=255) taatgagcgcggttggcacgacaatgcgcgaggatGCCGGCGCGCAGCCTCTCTCTAcgcg > 1:365251‑M1/36‑61 (MQ=255) taatgagcgcggttggcacgacaatgcgcgaggatGCCGGCGCGCAGCCTCTCTCTAcgcg < 2:712172‑M1/26‑1 (MQ=255) taatgagcgcggttggcacgacaatgcgcgaggatGCCGGCGCGCAGCCTCTCTCTAcgcg > 1:712172‑M1/36‑61 (MQ=255) cccGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGc < 2:171540/66‑1 (MQ=255) cccGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGc > 1:171540/1‑66 (MQ=255) tggcacgacaatgcgcgaggatGCCGGCGCGCAGCCTCTCTCTAcg < 1:264797‑M1/24‑1 (MQ=255) tggcacgacaatgcgcgaggatGCCGGCGCGCAGCCTCTCTCTAcg > 2:264797‑M1/23‑46 (MQ=255) ggccggcAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAGCGGCGGTAGCCCCGGCCATAGTAGCCATGGCCATAGTAGCCGCCa < 1:211555/134‑1 (MQ=255) | GAACTGGTCGACCATACGGTCGGGCGCGTGCTCGACCTGGTGGATTTGCCGGAGATCGGCCAGACGCTCGCGCCCAGCTGGGGCGGGCTGAACGCCCGGGCCGGCGACGCGGCCGGCAACTGAACTGCGGCCGGCGCGCAGCCTCTCTCTACGCGCCGGCATCCTCGCGCATTGTCGTGCCAACCGCGCTCATTACCAGCGGCGGTAGCCCCGGCCATAGTAGCCATGGCCATAGTAGCCGCCA > AM260479/3618173‑3618416 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |