New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	1718541 =	12 (0.360)	3 (0.100)	3/198	2.8	22.1%	coding (24/282 nt)	h16_B1530	Hypothetical protein
	?	AM260480	1718591 =	10 (0.330)					coding (74/282 nt)	h16_B1530	Hypothetical protein

CGGACGAAGACATCATTCCCGCGCGCCGCGACGCGCGCGTCGTTACCGGCCGGGACCGATAGCGAAGCCGCGCAGCCGCCGGTGCCAGGCCACCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTGGAGGTGCCGCTCGGGCTGGTCGTGCTGGTGGCGCCGGACGTGCCGGTAGAAG  >  AM260480/1718417‑1718626                                                                                                                             |                                                                                      cgGACGAAGACATCATTCCCGCGCGCCGCGACGCGCGCGTCGTTACCGGCCGGGACCGATAGCGAAGCCGCGCAGCCGCCGGTGCCAGGCCACCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCg                                                                              <  2:65765/134‑1 (MQ=255)                          ccgcGACGCGCGCGTCGTTACCGGCCGGGACCGATAGCGAAGCCGCGCAGCCGCCGGTGCCAGGCCACCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTg                                                      >  1:965160/1‑133 (MQ=255)                            gcgACGCGCGCGTCGTTACCGGCCGGGACCGATAGCGAAGCCGCGCAGCCGCCGGTGCCAGGCCACCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTGGAg                                                   >  1:430464/1‑134 (MQ=255)                              gACGCGCGCGTCGTTACCGGCCGGGACCGATAGCGAAGCCGCGCAGCCGCCGGTGCCAGGCCACCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTGGAGGt                                                 <  1:627510/134‑1 (MQ=255)                                cgcgcgcgTCGTTACCGGCCGGGACCGATAGCGAAGCCGCGCAGCCGCCGGTGCCAGGCCACCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTGGAGGTGc                                               <  2:832581/134‑1 (MQ=255)                                                       aCCGATAGCGAAGCCGCGCAGCCGCCGGTGCCAGGCCACCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTGGAGGTGCCGCTCGGGCTGGTCGTGCtggtt                        >  1:580947/1‑133 (MQ=255)                                                                             ctagctcaagcacttctaccggcacgtccggcgccaccagcacgaccaGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTGGAGGTGCCGCTCGGGCTGGTCGTGCTGGTGGCGCCGGACGTGCCGGTAGAAg  <  1:456598‑M1/86‑1 (MQ=255)                                                                             cgccgGTGCCAGGCCACCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTGGAGGTGCCGCTCGGGCTGGTCGTGCTGGTGGCGCCGGACGTGCCGGTAGAAg  <  1:727510/134‑1 (MQ=255)                                                                             cgccgGTGCCAGGCCACCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTGGAGGTGCCGCTCGGGCTGGTCGTGCTGGTGGCGCCGGACGTGCCGGTAGAAg  <  2:430464/134‑1 (MQ=255)                                                                                   caagcacttctaccggcacgtccggcgccaccagcacgaccaGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTgg                                                     >  1:183894‑M1/43‑77 (MQ=255)                                                                                   caagcacttctaccggcacgtccggcgccaccagcacgaccaGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTgg                                                     <  2:183894‑M1/35‑1 (MQ=255)                                                                                            aCCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCg                                                                                   >  1:607580/1‑38 (MQ=255)                                                                                            aCCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCg                                                                                   <  2:607580/38‑1 (MQ=255)                                                                                                gcggcTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTGGAGGTGCCGCTc                                          >  1:227530/1‑75 (MQ=255)                                                                                                gcggcTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTGGAGGTGCCGCTc                                          <  2:227530/75‑1 (MQ=255)                                                                                                                             |                                                                                      CGGACGAAGACATCATTCCCGCGCGCCGCGACGCGCGCGTCGTTACCGGCCGGGACCGATAGCGAAGCCGCGCAGCCGCCGGTGCCAGGCCACCGGCGGCTGTGCGCCGGCGTCAGCGGGCAGTGCCCGAGCCGCTGGCTGCACCGCTGCTGCCGCTGGAGGTGCCGCTCGGGCTGGTCGTGCTGGTGGCGCCGGACGTGCCGGTAGAAG  >  AM260480/1718417‑1718626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.