| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 3446863 = | 15 (0.580) | 4 (0.170) | 4/194 | 1.8 | 26.2% | intergenic (+14/+9) | h16_A3186/h16_A3187 | aldehyde reductase, related to diketogulonate reductase/hypothetical membrane associated protein |
| ? | AM260479 | 3446884 = | 9 (0.390) | coding (411/423 nt) | h16_A3187 | hypothetical membrane associated protein | |||||
ATGTCGTCGTCGCACGGCAAGAGCAGCGCGCGCCAGGCTGCGGCGCGCGTGACCACCGACACCCGCGAGAAGGCGCGCAGCTACCTGGTGCGCTACGTCGAGCGCGAGCGCTACGTGGCCCGCGTGCCCTGAGGGCACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/3447003‑3446863‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcacgcgGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACATCTGCC > AM260479/3446884‑3447008 ATGTCGTCGTCGCACGGCAAGAGCAGCGCGCGCCAGGCTGCGGCGCGCGTGACCACCGACACCCGCGAGAAGGCGCGCAGCTACCTGGTGCGCTACGTCGAGCGCGAGCGCTACGTGGCCCGCGTGCCCTGAGG < 1:982917/134‑1 TCGTCGTCGCACGGCAAGAGCAGCGCGCGCCAGGCTGCGGCGCGCGTGACCACCGACACCCGCGAGAAGGCGCGCAGCTACCTGGTGCGCTACGTCGAGCGCGAGCGCTACGTGGCCCGCGTGCCCTGAGGGCA < 1:26566/134‑1 TCGTCGTCGCACGGCAAGAGCAGCGCGCGCCAGGCTGCGGCGCGCGTGACCACCGACACCCGCGAGAAGGCGCGCAGCTACCTGGTGCGCTACGTCGAGCGCGAGCGCTACGTGGCCCGCGTGCCCTGAGGGCA < 1:396320/134‑1 TCGTCGTCGCACGGCAAGAGCAGCGCGCGCCAGGCTGCGGCGCGCGTGACCACCGACACCCGCGAGAAGGCGCGCAGCTACCTGGTGCGCTACGTCGAGCGCGAGCGCTACGTGGCCCGCGTGCCCTGAGGGC < 2:743044/133‑1 GAAGGCGCGCAGCTACCTGGTGCGCTACGTCGAGCGCGAGCGCTACGTGGCCCGCGTGCCCTGAGGGCACGCGGGCCACGTAGCGCTCGCGC > 1:716612/1‑92 GAAGGCGCGCAGCTACCTGGTGCGCTACGTCGAGCGCGAGCGCTACGTGGCCCGCGTGCCCTGAGGGCACGCGGGCCACGTAGCGCTCGCGC < 2:716612/92‑1 AAGGCGCGCAGCTACCTGGTGCGCTACGTCGAGCGCGAGCGCTACGTGGCCCGCGTGCCCTGAGGGCACGCGGGCCACGTAGCGCTCGCG > 1:133001/1‑90 AAGGCGCGCAGCTACCTGGTGCGCTACGTCGAGCGCGAGCGCTACGTGGCCCGCGTGCCCTGAGGGCACGCGGGCCACGTAGCGCTCGCG < 2:133001/90‑1 AGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACATCTGC < 2:623344/134‑1 GGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACATCTGCC < 1:158111/134‑1 CACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACAT < 1:704199/126‑1 CACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTAGCGCGCGCTGCTCTTGCCGTGCGACGACGACAT > 2:704199/1‑126 CACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCA < 1:334949/77‑1 CACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCA > 2:334949/1‑77 ATGTCGTCGTCGCACGGCAAGAGCAGCGCGCGCCAGGCTGCGGCGCGCGTGACCACCGACACCCGCGAGAAGGCGCGCAGCTACCTGGTGCGCTACGTCGAGCGCGAGCGCTACGTGGCCCGCGTGCCCTGAGGGCACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/3447003‑3446863‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcacgcgGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACATCTGCC > AM260479/3446884‑3447008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |