| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 3446863 = | 15 (0.580) | 4 (0.170) | 4/194 | 1.8 | 26.2% | intergenic (+14/+9) | h16_A3186/h16_A3187 | aldehyde reductase, related to diketogulonate reductase/hypothetical membrane associated protein |
| ? | AM260479 | 3446884 = | 9 (0.390) | coding (411/423 nt) | h16_A3187 | hypothetical membrane associated protein | |||||
GCTGTCGCATACGCTGTCGGCCGCCCAGCTGGCCGAGCTCGACCGCATCTTCCCGCCGCCCGACGGCCCGGGCCCGCTGGAAATGCTTTGACCAGGCTGCCGCGCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACATCTGCCCATCCAGG > AM260479/3446759‑3447016 | gcTGTCGCATACGCTGTCGGCCGCCCAGCTGGCCGAGCTCGACCGCATCTTCCCGCCGCCCGACGGCCCGGGCCCGCTGGAAATGCTTTGACCAGGCTGCCGCGCGCGTGCCCTCAGGGCACGCGGGCCACg > 1:861804/1‑132 (MQ=255) tCGGCCGCCCAGCTGGCCGAGCTCGACCGCATCTTCCCGCCGCCCGACGGCCCGGGCCCGCTGGAAATGCTTTGACCAGGCTGCCGCGCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGAc < 2:861804/133‑1 (MQ=255) ggCCGAGCTCGACCGCATCTTCCCGCCGCCCGACGGCCCGGGCCCGCTGGAAATGCTTTGACCAGGCTGCCGCGCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAgg > 2:357754/1‑132 (MQ=255) gaaggcgcgcagctacctggtgcgctacgtcgagcgcgagcgctacgtggcccgcgtgccctgagggcacgcgGGCCACGTAgcgctcgcgc > 1:716612‑M2/74‑92 (MQ=255) gaaggcgcgcagctacctggtgcgctacgtcgagcgcgagcgctacgtggcccgcgtgccctgagggcacgcgGGCCACGTAgcgctcgcgc < 2:716612‑M2/19‑1 (MQ=255) aaggcgcgcagctacctggtgcgctacgtcgagcgcgagcgctacgtggcccgcgtgccctgagggcacgcgGGCCACGTAgcgctcgcg > 1:133001‑M2/73‑90 (MQ=255) aaggcgcgcagctacctggtgcgctacgtcgagcgcgagcgctacgtggcccgcgtgccctgagggcacgcgGGCCACGTAgcgctcgcg < 2:133001‑M2/18‑1 (MQ=255) cGACGGCCCGGGCCCGCTGGAAATGCTTTGACCAGGCTGCCGCGCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGAc > 2:3721/1‑89 (MQ=255) cGACGGCCCGGGCCCGCTGGAAATGCTTTGACCAGGCTGCCGCGCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGAc < 1:3721/89‑1 (MQ=255) cgCTGGAAATGCTTTGACCAGGCTGCCGCGCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAg < 1:357754/134‑1 (MQ=255) aaaTGCTTTGACCAGGCTGCCGCGCGCGTGCCCTCAGGGCACGCGGGCCACGTAg > 1:795718/1‑55 (MQ=255) aaaTGCTTTGACCAGGCTGCCGCGCGCGTGCCCTCAGGGCACGCGGGCCACGTAg < 2:795718/55‑1 (MQ=255) gcgcgagcgctacgtggccCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTtc > 1:716612‑M1/20‑92 (MQ=255) gcgcgagcgctacgtggccCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTtc < 2:716612‑M1/73‑1 (MQ=255) cgcgagcgctacgtggccCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCtt > 1:133001‑M1/19‑90 (MQ=255) cgcgagcgctacgtggccCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCtt < 2:133001‑M1/72‑1 (MQ=255) gCCGCGCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGt > 1:623344/1‑134 (MQ=255) TGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGcgacgacga < 1:396320‑M1/134‑1 (MQ=255) TGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGcgacgacga < 1:26566‑M1/134‑1 (MQ=255) GCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGcgacgacga < 2:743044‑M1/133‑1 (MQ=255) CCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACAt < 1:982917‑M1/134‑1 (MQ=255) agggcacgcgGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACATCTGc < 2:623344‑M2/124‑1 (MQ=255) gggcacgcgGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACATCTGcc < 1:158111‑M2/125‑1 (MQ=255) cacgcgGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCa > 2:334949‑M2/7‑77 (MQ=255) cacgcgGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCa < 1:334949‑M2/71‑1 (MQ=255) cacgcgGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACAt < 1:704199‑M2/120‑1 (MQ=255) cacgcgGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTAGCGCGCGCTGCTCTTGCCGTGCGACGACGACAt > 2:704199‑M2/7‑126 (MQ=255) ggCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGgc < 2:1025043/89‑1 (MQ=255) ggCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGgc > 1:1025043/1‑89 (MQ=255) ggCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACATCTGCCCATCCagg > 1:626984/1‑133 (MQ=255) | GCTGTCGCATACGCTGTCGGCCGCCCAGCTGGCCGAGCTCGACCGCATCTTCCCGCCGCCCGACGGCCCGGGCCCGCTGGAAATGCTTTGACCAGGCTGCCGCGCGCGTGCCCTCAGGGCACGCGGGCCACGTAGCGCTCGCGCTCGACGTAGCGCACCAGGTAGCTGCGCGCCTTCTCGCGGGTGTCGGTGGTCACGCGCGCCGCAGCCTGGCGCGCGCTGCTCTTGCCGTGCGACGACGACATCTGCCCATCCAGG > AM260479/3446759‑3447016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |