| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 906054 | 21 (0.760) | 5 (0.200) | 5/196 | 1.7 | 22.1% | coding (234/474 nt) | h16_B0799 | transcriptional regulator, MarR‑family |
| ? | AM260480 | = 906098 | 16 (0.640) | coding (278/474 nt) | h16_B0799 | transcriptional regulator, MarR‑family | |||||
CCGGGATTGGACCAGACTTCGCTCGGGCAGGAGGTCGGCCTGGACCGGACCACGACCGCCGACGTCGTGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/905980‑906054‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgccggTCGGCGGGGTTGTCGCGGCGCTCTACCAGCCCGCGCTCCTCGAGCCGGCGCACGACGTCGGCGGTCGTGGTCCGGTCCAGGCCGACCTCCTGCCCGAGCGAAGTCTGGTCCAATCCCGGCAGCACCGACAGCA < AM260480/906098‑905966 CCGGGATTGGACCAGACTTCGCTCGGGCAGGAGGTCGGCCTGGACCGGACCACGACCGCCGACGTCGTGCGCCGGTCGGC > 1:933100/1‑80CCGGGATTGGACCAGACTTCGCTCGGGCAGGAGGTCGGCCTGGACCGGACCACGACCGCCGACGTCGTGCGCCGGTCGGC < 2:933100/80‑1 GACCAGACTTCGCTCGGGCAGGAGGTCGGCCTGGACCGGACCACGACCGCCGACGTCGTGCGCCGGTCGGCGGGGTTGTCGCGGCGCTCTACCAGCCCGCGCTCCTCGAGCCGGCGC < 1:329873/117‑1 GACCAGACTTCGCTCGGGCAGGAGGTCGGCCTGGACCGGACCACGACCGCCGACGTCGTGCGCCGGTCGGCGGGGTTGTCGCGGCGCTCTACCAGCCCGCGCTCCTCGAGCCGGCGC > 2:329873/1‑117 CCGGACCACGACCGCCGACGTCGTGCGCCGGTCGGCGGGGTTGTCGCGGCGCTCTACCAGCCCGCGCTCCTCGAGCCGGCGCACGACGTCGGCGGTCGTGGTCCGGTCCAGGCCGACCTCCTGCCCGAGCGAcg > 2:528870/1‑132 CGCCGGTCGGCGGGGTTGTCGCGGCGCTCTACCAGCCCGCGCTCCTCGAGCCGGCGCACGACGTCGGCGGTCGTGGTCCGGTCCAGGCCGACCTCCTGCCCGAGCGAAGTCTGGTCCAATCCCGGCAGCACCGA < 2:77173/134‑1 GTCGGCGGGGTTGTCGCGGCGCTCTACCAGCCCGCGCTCCTCGAGCCGGCGCACGACGTCGGCGGTCGTGGTCCGGTCCAGGCCGACCTCCTGCCCGAGCGAAGTCTGGTCCAATCCCGGCAGCACCGACAGCA < 1:135893/134‑1 CCGGGATTGGACCAGACTTCGCTCGGGCAGGAGGTCGGCCTGGACCGGACCACGACCGCCGACGTCGTGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/905980‑906054‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgccggTCGGCGGGGTTGTCGCGGCGCTCTACCAGCCCGCGCTCCTCGAGCCGGCGCACGACGTCGGCGGTCGTGGTCCGGTCCAGGCCGACCTCCTGCCCGAGCGAAGTCTGGTCCAATCCCGGCAGCACCGACAGCA < AM260480/906098‑905966 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |