| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 2153774 = | 12 (0.440) | 6 (0.240) | 4/196 | 2.0 | 33.4% | coding (202/420 nt) | h16_B1907 | conserved hypothetical protein |
| ? | AM260480 | 2153856 = | 13 (0.520) | coding (284/420 nt) | h16_B1907 | conserved hypothetical protein | |||||
GCCGAGGCGAAGTACAGGCTCTTGCCGGCGCGGGTGAGTTGCGCCGTGGCGCGCAGCCGGCCCGTGCTGGCCTTGCTGAGATAGCTGATCGTCAGCATGACGGTGACCGCGTGGCCGAGCGTGCCGTCCGGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/2153910‑2153774‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggccggcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCACCCTACCGGAGG > AM260480/2153856‑2153987 GCCGAGGCGAAGTACAGGCTCTTGCCGGCGCGGGTGAGTTGCGCCGTGGCGCGCAGCCGGCCCGTGCTGGCCTTGCTGAGATAGCTGATCGTCAGCATGACGGTGACCGCGTGGCCGAGCGTGCCGTCCGGGCC > 2:109333/1‑134 GCTGATCGTCAGCATGACGGTGACCGCGTGGCCGAGCGTGCCGTCCGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTG > 2:1002781/1‑134 GCTGATCGTCAGCATGACGGTGACCGCGTGGCCGAGCGTGCCGTCCGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTG > 2:1002782/1‑134 CGTGGCCGAGCGTGCCGTCCGGGCCGGCTGCGCGCCACGGCGCAACTCACC > 1:235787/1‑51 CGTGGCCGAGCGTGCCGTCCGGGCCGGCTGCGCGCCACGGCGCAACTCACC < 2:235787/51‑1 CGTCCGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCAC < 1:1002781/134‑1 CGTCCGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCAC < 1:1002782/134‑1 CGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCACCCTA < 1:678361/134‑1 GGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAA > 1:426312/1‑42 GGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAA < 2:426312/42‑1 GCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCACCCTACCGGAGG > 2:535968/1‑134 GCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGG < 1:315468/59‑1 GCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGG > 2:315468/1‑59 GCCGAGGCGAAGTACAGGCTCTTGCCGGCGCGGGTGAGTTGCGCCGTGGCGCGCAGCCGGCCCGTGCTGGCCTTGCTGAGATAGCTGATCGTCAGCATGACGGTGACCGCGTGGCCGAGCGTGCCGTCCGGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/2153910‑2153774‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggccggcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCACCCTACCGGAGG > AM260480/2153856‑2153987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |