New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	2153774 =	12 (0.440)	6 (0.240)	4/196	2.0	33.4%	coding (202/420 nt)	h16_B1907	conserved hypothetical protein
	?	AM260480	2153856 =	13 (0.520)					coding (284/420 nt)	h16_B1907	conserved hypothetical protein

ACCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCACCCTACCGGAGG  >  AM260480/2153729‑2153987                                                                                                                                |                                                                                                                                    aCCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTgcgcgc                                                                                                                               >  2:678361/1‑134 (MQ=255)                gACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTc                                                                                                                  <  1:133010/132‑1 (MQ=255)                                     gggTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTa                                                                                           >  2:461866/1‑134 (MQ=255)                                            ccgccgGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGcc                                                                                    >  1:863930/1‑134 (MQ=255)                                                 GGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTcggc                                                                               >  2:109333‑M1/1‑134 (MQ=255)                                                           gCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGac                                                                      >  2:964004/1‑133 (MQ=255)                                                                        cgcgGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCg                                                        >  2:394044/1‑134 (MQ=255)                                                                          gctgatcgtcagcatgacggtgaccgcgtggccgagcgtgccgtccgggccggcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTg                                                      >  2:1002782‑M2/55‑134 (MQ=255)                                                                          gctgatcgtcagcatgacggtgaccgcgtggccgagcgtgccgtccgggccggcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTg                                                      >  2:1002781‑M2/55‑134 (MQ=255)                                                                                           aCGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCgcgc                                      <  1:461866/133‑1 (MQ=255)                                                                                               tCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTgc                                                                                                                                   <  1:668390/36‑1 (MQ=255)                                                                                               tCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTgc                                                                                                                                   >  2:668390/1‑36 (MQ=255)                                                                                               tCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGa                                                                <  2:374176/103‑1 (MQ=255)                                                                                               tCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGa                                                                >  1:374176/1‑103 (MQ=255)                                                                                                    cgtggccgagcgtgccgtccgggccggcTGCGCGCCACGGCGCAACTCAcc                                                                                                               <  2:235787‑M2/23‑1 (MQ=255)                                                                                                    cgtggccgagcgtgccgtccgggccggcTGCGCGCCACGGCGCAACTCAcc                                                                                                               >  1:235787‑M2/29‑51 (MQ=255)                                                                                                                 ccAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTc                                                                                  >  1:933769/1‑67 (MQ=255)                                                                                                                 ccAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTc                                                                                  <  2:933769/67‑1 (MQ=255)                                                                                                                   cgtccgggccggcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCAc             <  1:1002781‑M2/121‑1 (MQ=255)                                                                                                                   cgtccgggccggcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCAc             <  1:1002782‑M2/121‑1 (MQ=255)                                                                                                                       cgggccggcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCACCCTa         <  1:678361‑M2/125‑1 (MQ=255)                                                                                                                        gggccggcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCaa                                                                                                    >  1:426312‑M2/9‑42 (MQ=255)                                                                                                                        gggccggcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCaa                                                                                                    <  2:426312‑M2/34‑1 (MQ=255)                                                                                                                              gcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTcggcgg                                                                             >  2:315468‑M2/3‑59 (MQ=255)                                                                                                                              gcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTcggcgg                                                                             <  1:315468‑M2/57‑1 (MQ=255)                                                                                                                              gcTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCACCCTACCGGAgg  >  2:535968‑M2/3‑134 (MQ=255)                                                                                                                                |                                                                                                                                    ACCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCCTCGGCGGAGCTGACCACCGATGCCGGCGTGCTGGTGGCGACCGCGCAAGGCACGTTCAAACGATCCCGCACCCTACCGGAGG  >  AM260480/2153729‑2153987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.