New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	2153774 =	12 (0.440)	6 (0.240)	4/196	2.0	33.4%	coding (202/420 nt)	h16_B1907	conserved hypothetical protein
	?	AM260480	2153856 =	13 (0.520)					coding (284/420 nt)	h16_B1907	conserved hypothetical protein

GCCAGCGTCGGCGACGGCCGCTGCACCTTCGAGCTCGACCTCGAGCCACGCCACCTGAACCGGCAGGGCAGCGTGCAGGGCGGCGTCACCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCC  >  AM260480/2153642‑2153905                                                                                                                                     |                                                                                                                                    cctccggtagggtgcgggatcgtttgaacgtgccttgcgcggtcgccaccagcacgccggcatcggtggtcagctccgccgaggcgaagtacaggctcttgccggcgcgggtgagttgcgccgtggcgcgcaGc                                                                                                                                    >  2:535968‑M1/133‑134 (MQ=255)        tagggtgcgggatcgtttgaacgtgccttgcgcggtcgccaccagcacgccggcatcggtggtcagctccgccgaggcgaagtacaggctcttgccggcgcgggtgagttgcgccgtggcgcgcaGCCGGCCCg                                                                                                                             <  1:678361‑M1/9‑1 (MQ=255)            gtgcgggatcgtttgaacgtgccttgcgcggtcgccaccagcacgccggcatcggtggtcagctccgccgaggcgaagtacaggctcttgccggcgcgggtgagttgcgccgtggcgcgcaGCCGGCCCGGACg                                                                                                                         <  1:1002782‑M1/13‑1 (MQ=255)            gtgcgggatcgtttgaacgtgccttgcgcggtcgccaccagcacgccggcatcggtggtcagctccgccgaggcgaagtacaggctcttgccggcgcgggtgagttgcgccgtggcgcgcaGCCGGCCCGGACg                                                                                                                         <  1:1002781‑M1/13‑1 (MQ=255)                     cTGCACCTTCGAGCTCGACCTCGAGCCACGCCACCTGAACCGGCAGGGCAGCGTGCAGGGCGGCGTCACCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCg                                                                                                                <  1:22175/134‑1 (MQ=255)                         aCCTTCGAGCTCGACCTCGAGCCACGCCACCTGAACCGGCAGGGCAGCGTGCAGGGCGGCGTCACCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCccgc                                                                                                                                    >  1:238826/1‑110 (MQ=255)                         aCCTTCGAGCTCGACCTCGAGCCACGCCACCTGAACCGGCAGGGCAGCGTGCAGGGCGGCGTCACCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCccgc                                                                                                                                    <  2:238826/110‑1 (MQ=255)                                aGCTCGACCTCGAGCCACGCCACCTGAACCGGCAGGGCAGCGTGCAGGGCGGCGTCACCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTACCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTc                                                                                                     <  2:28490/134‑1 (MQ=255)                                                     cacgccggcatcggtggtcagctccgccgaggcgaagtacaggctcttgccggcgcgggtgagttgcgccgtggcgcgcaGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGc                                                                                >  2:1002781‑M1/81‑134 (MQ=255)                                                     cacgccggcatcggtggtcagctccgccgaggcgaagtacaggctcttgccggcgcgggtgagttgcgccgtggcgcgcaGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGc                                                                                >  2:1002782‑M1/81‑134 (MQ=255)                                                                            ccgccgaggcgaagtacaggctcttgccggcgcgggtgagttgcgccgtggcgcgcaGc                                                                                                                                    <  1:315468‑M1/2‑1 (MQ=255)                                                                            ccgccgaggcgaagtacaggctcttgccggcgcgggtgagttgcgccgtggcgcgcaGc                                                                                                                                    >  2:315468‑M1/58‑59 (MQ=255)                                                                              gggCGGCGTCACCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACTGTCATGCTGACGATCAGCTAtct                                                                           >  1:98707/1‑114 (MQ=255)                                                                              gggCGGCGTCACCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTAtct                                                                           <  2:98707/114‑1 (MQ=255)                                                                                        aCCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCa                                                                      >  1:803442/1‑109 (MQ=255)                                                                                        aCCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCa                                                                      <  2:803442/109‑1 (MQ=255)                                                                                        aCCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTgcgcgc                                             >  2:678361/1‑134 (MQ=255)                                                                                                   ttgccggcgcgggtgagttgcgccgtggcgcgcaGCCGGccc                                                                                                                              >  1:426312‑M1/35‑42 (MQ=255)                                                                                                   ttgccggcgcgggtgagttgcgccgtggcgcgcaGCCGGccc                                                                                                                              <  2:426312‑M1/8‑1 (MQ=255)                                                                                                       gACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTc                                <  1:133010/132‑1 (MQ=255)                                                                                                              ggtgagttgcgccgtggcgcgcaGCCGGCCCGGACGGCACGCTCGGCCAcg                                                                                                          <  2:235787‑M1/28‑1 (MQ=255)                                                                                                              ggtgagttgcgccgtggcgcgcaGCCGGCCCGGACGGCACGCTCGGCCAcg                                                                                                          >  1:235787‑M1/24‑51 (MQ=255)                                                                                                                            gggTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTa         >  2:461866/1‑134 (MQ=255)                                                                                                                                   ccgccgGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGcc  >  1:863930/1‑134 (MQ=255)                                                                                                                                     |                                                                                                                                    GCCAGCGTCGGCGACGGCCGCTGCACCTTCGAGCTCGACCTCGAGCCACGCCACCTGAACCGGCAGGGCAGCGTGCAGGGCGGCGTCACCGCCACGCTGCTCGACGCCGCCTGCGGCTACGCCGGGTTGCCCGCCGGCCCGGACGGCACGCTCGGCCACGCGGTCACCGTCATGCTGACGATCAGCTATCTCAGCAAGGCCAGCACGGGCCGGCTGCGCGCCACGGCGCAACTCACCCGCGCCGGCAAGAGCCTGTACTTCGCC  >  AM260480/2153642‑2153905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.