New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	128407 =	16 (0.580)	4 (0.160)	4/196	2.0	20.2%	coding (823/1728 nt)	h16_B0110	ABC‑type transporter, duplicated permease domains
	?	AM260480	128449 =	17 (0.680)					coding (865/1728 nt)	h16_B0110	ABC‑type transporter, duplicated permease domains

ATCACGGACTTTGGCGTACCCAAGGTGGTGGGCGGCGGTTATCCGGTGCTGGCGCTGGAAGCGTACAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCG  >  AM260480/128275‑128535                                                                                                                                     |                                                                                                                                 aTCACGGACTTTGGCGTACCCAAGGTGGTGGGCGGCGGTTATCCGGTGCTGGCGCTGGAAGCGTACAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCcgc                                                                                                                                 >  2:863652/1‑134 (MQ=255)     agcgcggtggcgatcactgccagcagcgcggcactgaccagcgccaccagcagcaggcacgcgccgtcgcggccgcgctcgggcgccggcacatacacctgcgcgcggctgcccatctgtgtgcgctggcgctg                                                                                                                             >  1:531140‑M1/129‑134 (MQ=255)        aCTTTGGCGTACCCAAGGTGGTGGGCGGCGGTTATCCGGTGCTGGCGCTGGAAGCGTACAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCgctgct                                                                                                                           >  2:588918/1‑133 (MQ=255)              gCGTACCCAAGGTGGTGGGCGGCGGTTATCCGGTGCTGGCGCTGGAAGCGTACAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCtt                                                                                                                     <  2:507669/133‑1 (MQ=255)                   cccAAGGTGGTGGGCGGCGGTTATCCGGTGCTGGCGCTGGAAGCGTACAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCg                                                                                                                <  1:910339/133‑1 (MQ=255)                          agcagcgcggcactgaccagcgccaccagcagcaggcacgcgccgtcgcggccgcgctcgggcgccggcacatacacctgcgcgcggctgcccatctgtgtgcgctgGCGCTGCTGACCTTTGCCg                                                                                                                <  2:934913‑M1/19‑1 (MQ=255)                          agcagcgcggcactgaccagcgccaccagcagcaggcacgcgccgtcgcggccgcgctcgggcgccggcacatacacctgcgcgcggctgcccatctgtgtgcgctgGCGCTGCTGACCTTTGCCg                                                                                                                >  1:934913‑M1/108‑126 (MQ=255)                                    cactgaccagcgccaccagcagcaggcacgcgccgtcgcggccgcgctcgggcgccggcacatacacctgcgcgcggctgcccatctgtgtgcgctgGCgctgc                                                                                                                            >  1:679582‑M1/98‑104 (MQ=255)                                    cactgaccagcgccaccagcagcaggcacgcgccgtcgcggccgcgctcgggcgccggcacatacacctgcgcgcggctgcccatctgtgtgcgctgGCgctgc                                                                                                                            <  2:679582‑M1/7‑1 (MQ=255)                                             gcgccaccagcagcaggcacgcgccgtcgcggccgcgctcgggcgccggcacatacacctgcgcgcggctgcccatctgtgtgcgctgGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGcagcgc                                                                                         <  1:848668‑M1/42‑1 (MQ=255)                                             gcgccaccagcagcaggcacgcgccgtcgcggccgcgctcgggcgccggcacatacacctgcgcgcggctgcccatctgtgtgcgctgGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGcagcgc                                                                                         >  2:848668‑M1/89‑130 (MQ=255)                                                                tACAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCcg                                                                  <  1:576291/134‑1 (MQ=255)                                                                  cAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCcgc                                                                                                                                 >  2:520712/1‑69 (MQ=255)                                                                  cAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCcgc                                                                                                                                 <  1:520712/69‑1 (MQ=255)                                                                  cAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCcgcg                                                                <  1:588918/134‑1 (MQ=255)                                                                                                 cgcgGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCgg                                 >  1:803743/1‑134 (MQ=255)                                                                                                   cggcgCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGcc                               >  1:549962/1‑134 (MQ=255)                                                                                                     gcgcgcTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGctgc                             <  2:803743/134‑4 (MQ=255)                                                                                                         gcTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACg                         <  2:606426/134‑1 (MQ=255)                                                                                                                  cATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGcc                <  2:549962/134‑1 (MQ=255)                                                                                                                           gctgGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCtgg       >  1:682410/1‑134 (MQ=255)                                                                                                                            ctgGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCtggt      <  1:863652/134‑1 (MQ=255)                                                                                                                                cgcCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGgcg  >  1:317279/1‑134 (MQ=255)                                                                                                                                     |                                                                                                                                 ATCACGGACTTTGGCGTACCCAAGGTGGTGGGCGGCGGTTATCCGGTGCTGGCGCTGGAAGCGTACAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCG  >  AM260480/128275‑128535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.