New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	128407 =	16 (0.580)	4 (0.160)	4/196	2.0	20.2%	coding (823/1728 nt)	h16_B0110	ABC‑type transporter, duplicated permease domains
	?	AM260480	128449 =	17 (0.680)					coding (865/1728 nt)	h16_B0110	ABC‑type transporter, duplicated permease domains

TACAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCGCTGGTCAGTGCCGCGCTGCTGGCAGTGATCGCCACCGCGCT  >  AM260480/128338‑128576                                                                                                                |                                                                                                                                tACAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCcg                                                                                                           <  1:576291/134‑1 (MQ=255)   cAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCcgcg                                                                                                         <  1:588918/134‑1 (MQ=255)                                  cgcgGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCgg                                                                          >  1:803743/1‑134 (MQ=255)                                    cggcgCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGcc                                                                        >  1:549962/1‑134 (MQ=255)                                      gcgcgcTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGctgc                                                                      <  2:803743/134‑4 (MQ=255)                                          gcTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACg                                                                  <  2:606426/134‑1 (MQ=255)                                                   cATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGcc                                                         <  2:549962/134‑1 (MQ=255)                                                            gctgGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCtgg                                                >  1:682410/1‑134 (MQ=255)                                                             ctgGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCtggt                                               <  1:863652/134‑1 (MQ=255)                                                                 cgcCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGgcg                                           >  1:317279/1‑134 (MQ=255)                                                                      gcgctgctgcattgccatgtccacggcaaaggtcagcagcgcCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGgcgc                                          >  2:848668‑M2/43‑130 (MQ=255)                                                                      gcgctgctgcattgccatgtccacggcaaaggtcagcagcgcCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGgcgc                                          <  1:848668‑M2/88‑1 (MQ=255)                                                                           GCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGcc                                                                        <  2:95794‑M1/95‑1 (MQ=255)                                                                           GCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGcc                                                                        >  1:95794‑M1/1‑95 (MQ=255)                                                                                      ccGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCGCTGGTCAGTGCCGCgctcgg                       <  2:682410/133‑4 (MQ=255)                                                                                        gTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCGCTGGTCAGTGCCGCGCTGCTgg                     >  1:446378/1‑133 (MQ=255)                                                                                             cggcaaaggtcagcagcgcCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCGCTGGTCAGTGCCGCgctgct                       >  1:934913‑M2/20‑126 (MQ=255)                                                                                             cggcaaaggtcagcagcgcCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCGCTGGTCAGTGCCGCgctgct                       <  2:934913‑M2/107‑1 (MQ=255)                                                                                             cATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGAc                                                                   <  2:405352/82‑1 (MQ=255)                                                                                             cATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGAc                                                                   >  1:405352/1‑82 (MQ=255)                                                                                               tGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCGCTGGTCAGTGCCGCGCTGCTGGCAGTGATc             <  2:446378/134‑1 (MQ=255)                                                                                                    aTGCAGCAGCGCCAGCGCACACAGATGGGCAGCcg                                                                                                           >  2:1015800/1‑35 (MQ=255)                                                                                                    aTGCAGCAGCGCCAGCGCACACAGATGGGCAGCcg                                                                                                           <  1:1015800/35‑1 (MQ=255)                                                                                                         gcagcgcCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCGCTGGTCAGTg                                 >  1:679582‑M2/8‑104 (MQ=255)                                                                                                         gcagcgcCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCGCTGGTCAGTg                                 <  2:679582‑M2/97‑1 (MQ=255)                                                                                                          cagcgcCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCGCTGGTCAGTGCCGCGCTGCTGGCAGTGATCGCCACCGCGCt  >  1:531140‑M2/7‑134 (MQ=255)                                                                                                                |                                                                                                                                TACAAGGCGGTGGTCGGGCAGCAGCAGTTCGACCGCGGCGCGCTGATCGGCATGCTGCTGCTGGCGCCCGCGCTGCTGACCTTTGCCGTGGACATGGCAATGCAGCAGCGCCAGCGCACACAGATGGGCAGCCGCGCGCAGGTGTATGTGCCGGCGCCCGAGCGCGGCCGCGACGGCGCGTGCCTGCTGCTGGTGGCGCTGGTCAGTGCCGCGCTGCTGGCAGTGATCGCCACCGCGCT  >  AM260480/128338‑128576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.