New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	1196561 =	9 (0.330)	4 (0.160)	4/196	2.0	27.4%	coding (639/879 nt)	h16_B1060	Hypothetical protein
	?	AM260480	1196660 =	13 (0.520)					coding (738/879 nt)	h16_B1060	Hypothetical protein

CGGCGGTGCTGCGGCTGCTGCTGGCGCCGCTGCCCGGCAATGTGCTGTCGATCACCTTCCACAAGCGGCGCGGGCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTCCGATGCCGTACTGGATCGCGGTGCACCTGCCGCGCCTGCCCCTGGACGCCCTGCAGC  >  AM260480/1196536‑1196788                                                                                                                             |                                                                                                                                 cggcggTGCTGCGGCTGCTGCTGGCGCCGCTGCCCGGCAATGTGCTGTCGATCACCTTCCACAAGCGGCGCGGGCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCAcgcgcg                                                                                                                           >  1:627368/1‑132 (MQ=255)      gccaggcggctgcgcgcgtggccgctgccatcccgtccaggcgcagcagcagcggcgtgtcccgcaccggcccgcgccgcttgtggaaggtgatcgacagcacattgccgggcagcggcCACGCGCGCAgccgc                                                                                                                    <  2:948382‑M2/15‑1 (MQ=255)           gcggctgcgcgcgtgGCCGCTGCCCGGCAATGTGCTGTCGATCACCTTCCACAAGCGGCGCGGGCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCgcctggc                                                                                                               <  2:948382‑M1/119‑1 (MQ=255)                     ctgGCGCCGCTGCCCGGCAATGTGCTGTCGATCACCTTCCACAAGCGGCGCGGGCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCgg                                                                                                      <  2:525849/133‑1 (MQ=255)                             GCTGCCCGGCAATGTGCTGTCGATCACCTTCCACAAGCGGCGCGGGCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCAc                                                                                             >  2:627368‑M1/1‑134 (MQ=255)                                GCCCGGCAATGTGCTGTCGATCACCTTCCACAAGCGGCGCGGGCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTg                                                                                          <  2:314057‑M1/134‑1 (MQ=255)                                  CCGGCAATGTGCTGTCGATCACCTTCCACAAGCGGCGCGGGCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGcc                                                                                        <  1:116739‑M1/134‑1 (MQ=255)                                                                aGCGGCGCGGGCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTcc                                                          >  2:923414/1‑134 (MQ=255)                                                                aGCGGCGCGGGCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTcc                                                          <  2:116739/134‑1 (MQ=255)                                                                  cggcgCGGGCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTCCGa                                                        >  2:233127/1‑134 (MQ=255)                                                                        gggCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCgcctggcc                                                                                                              >  1:214745/1‑74 (MQ=255)                                                                        gggCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCgcctggcc                                                                                                              <  2:214745/74‑1 (MQ=255)                                                                         ggCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTCCGATGCCGTa                                                 >  2:87494/1‑134 (MQ=255)                                                                                    gACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTCCGATGCCGTACTGGATCGCgg                                      <  1:768120/134‑1 (MQ=255)                                                                                        gtggaaggtgatcgacagcacattgccgggcagcggcCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCAc                                                                                             >  2:607162‑M2/38‑75 (MQ=255)                                                                                        gtggaaggtgatcgacagcacattgccgggcagcggcCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCAc                                                                                             <  1:607162‑M2/38‑1 (MQ=255)                                                                                             ctgctgctgCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTCCGATGCCGTACTGGATCGCGGTGCACCTGc                             >  2:224565/1‑134 (MQ=255)                                                                                                ctgctgcGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTCCGATGCCGTACTGGATCGCGGTGCACCTGcc                            <  1:923414/132‑1 (MQ=255)                                                                                                  gctgcGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCa                                                                                                    >  2:760050/1‑58 (MQ=255)                                                                                                  gctgcGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCa                                                                                                    <  1:760050/58‑1 (MQ=255)                                                                                                             attgccgggcagcggcCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTCCGATGCCGTACTGGATCGCGGTGCACCTGCCGCGCCTGCCCCTGGa             >  1:808120‑M2/17‑134 (MQ=255)                                                                                                                      cagcggcCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTCCGATGCCGTACTGGATc                                          >  1:835961‑M2/8‑96 (MQ=255)                                                                                                                      cagcggcCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTCCGATGCCGTACTGGATc                                          <  2:835961‑M2/89‑1 (MQ=255)                                                                                                                        gcggcCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTCCGATGCCGTACTGGATCGCGGTGCACCTGCCGCGCCTGCCCCTGGACGCCCTGCAGc  <  1:87494‑M2/129‑1 (MQ=255)                                                                                                                             |                                                                                                                                 CGGCGGTGCTGCGGCTGCTGCTGGCGCCGCTGCCCGGCAATGTGCTGTCGATCACCTTCCACAAGCGGCGCGGGCCGGTGCGGGACACGCCGCTGCTGCTGCGCCTGGACGGGATGGCAGCGGCCACGCGCGCAGCCGCCTGGCCTGTCCCGGCAGGAGCACCTGCCTTGTCTGAATCGTCTTCTCCATCTTCTTCCGATGCCGTACTGGATCGCGGTGCACCTGCCGCGCCTGCCCCTGGACGCCCTGCAGC  >  AM260480/1196536‑1196788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.