| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_31 | 1 = | 0 (0.000) | 452 (0.380) +TTTAACAACTAATGTTGTT |
72/216 | 0.2 | 72.8% | intergenic (–/‑269) | –/rasttk_feature_creation_tool=RNA_reps_LSU_rRNA | –/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | AssemblyC74_contig_63 | = 176 | 397 (0.810) | intergenic (+2/‑26) | rasttk_feature_creation_tool=tRNAscan‑SE/rasttk_feature_creation_tool=tRNAscan‑SE | tRNA‑Ala‑TGC/tRNA‑Met‑CAT | |||||
Only 100 of 1941 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGATTTTA > AssemblyC74_contig_31/1‑135 | attggggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacacttt < 1:2529962‑M1/2‑1 (MQ=255) gttgaagacgtaacaaggtacccgtatcggaaggtgcgcctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttatgagaggttaactctcaaacacaATTGTTc < 1:127690‑M1/7‑1 (MQ=255) ggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTc < 2:3149217‑M1/7‑1 (MQ=255) ggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTc < 1:2926528‑M1/7‑1 (MQ=255) tcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGaa < 1:2851578‑M1/13‑1 (MQ=255) gtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttcttacgaatattacgtagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacaatTTTGTTCATTGaaaa > 1:792275‑M1/120‑134 (MQ=255) caaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGa < 2:1151128‑M1/20‑1 (MQ=255) tagccgtatcggaaggtgcggctggatcacctcctttataaggaatattacggagactacacaatttgtttttactttgttaagttttgagaggttttctctcaaacactTTTGTTCATTGAAAACTGGATAttt > 1:759044‑M1/111‑135 (MQ=255) gccgtatcggaaggtgcggctggatcacctcctttctaaggaatattccggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAATACTGGATATTTGa > 1:3439779‑M1/109‑135 (MQ=255) gccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTg > 2:2135549‑M1/109‑134 (MQ=255) gccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGa < 1:934025‑M1/27‑1 (MQ=255) tatcggtaggtgctgctggatcccctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 2:942769‑M1/105‑135 (MQ=255) tatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 2:610452‑M1/105‑135 (MQ=255) tatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 2:2735606‑M1/105‑135 (MQ=255) tatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 2:1520109‑M1/105‑135 (MQ=255) tatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 1:2027339‑M1/105‑135 (MQ=255) tatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 1:267168‑M1/105‑135 (MQ=255) ggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATg > 1:1818303‑M1/101‑135 (MQ=255) gaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgt < 2:750826‑M1/36‑1 (MQ=255) gggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 2:1967358‑M1/94‑135 (MQ=255) gggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 2:2016404‑M1/94‑135 (MQ=255) gggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 1:2216849‑M1/94‑135 (MQ=255) gggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 1:1348113‑M1/94‑135 (MQ=255) gcggctggatcacctcctttctaaggaatattacggagactacacaatttgttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 2:1697412‑M1/93‑134 (MQ=255) ccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATa > 2:157287‑M1/91‑134 (MQ=255) cttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACa < 1:1985017‑M1/46‑1 (MQ=255) gatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacacaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAAc > 2:2953385‑M1/87‑135 (MQ=255) ctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTa < 2:2435762‑M1/31‑1 (MQ=255) acctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCgag > 1:10004‑M1/83‑135 (MQ=255) cctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCgag < 1:3113027‑M1/53‑1 (MQ=255) gggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgta < 2:809999‑M1/37‑1 (MQ=255) gggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAacac < 1:2312912‑M1/58‑1 (MQ=255) ctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAacac < 2:2361368‑M1/58‑1 (MQ=255) tttctaaggaatattccggagactccacaatttgtttttacgttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACAcc > 2:2561193‑M1/77‑135 (MQ=255) gagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacgttagttgttaaaTTTGTTCATTGAAAACTGGATATTTg > 2:2203091‑M1/74‑99 (MQ=255) ctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACcgcg < 1:659482‑M1/62‑1 (MQ=255) taaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGACGTAAATGTAAGTAATACAAACCGAGAACACCGCGt < 2:3189866‑M1/63‑1 (MQ=255) taaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGt < 1:1931265‑M1/63‑1 (MQ=255) taaggaatattacggagactacacaatttgtttttactttgttcagtttcgagaggtttactctcaaacactTTTGTTCATTGa < 2:3477518‑M1/12‑1 (MQ=255) agcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACcgcg > 1:3264642‑M1/73‑134 (MQ=255) ctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTa < 2:1335029‑M1/31‑1 (MQ=255) aatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACAGAGAACACCGCGTTGAAt < 2:1813993‑M1/68‑1 (MQ=255) attacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTg < 2:2272069‑M1/71‑1 (MQ=255) ggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGaa < 1:2389219‑M1/73‑1 (MQ=255) ggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGc > 2:3548031‑M1/60‑135 (MQ=255) ctacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATGGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGGTGACTTTGAAAGCTGAAc < 1:2755225‑M1/81‑1 (MQ=255) aggaggtcagcgtttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAATTAATTGTTAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAAc > 1:531525‑M1/55‑135 (MQ=255) tacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGaa > 2:2864154‑M1/54‑133 (MQ=255) tacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGaa > 1:1742391‑M1/54‑133 (MQ=255) tacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGaa > 1:1554265‑M1/54‑133 (MQ=255) tacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAAc > 2:3232276‑M1/54‑134 (MQ=255) ggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAAc > 2:2070805‑M1/54‑134 (MQ=255) ggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAAc > 2:139718‑M1/54‑134 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTg > 2:1642781‑M1/53‑78 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATa < 2:3370494‑M1/44‑1 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaa < 1:214348‑M1/83‑1 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaa < 2:3027757‑M1/83‑1 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaa < 1:2811766‑M1/83‑1 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaa < 2:291494‑M1/83‑1 (MQ=255) aggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaaa < 2:1015509‑M1/84‑1 (MQ=255) aggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaaa < 1:1687123‑M1/84‑1 (MQ=255) cagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAAtt > 1:393040‑M1/48‑133 (MQ=255) tttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCt < 1:441970‑M1/95‑1 (MQ=255) tcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGcc > 2:1077370‑M1/41‑134 (MQ=255) ttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTg > 1:3039697‑M1/40‑135 (MQ=255) actttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGaa > 1:1228665‑M1/38‑135 (MQ=255) actttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGa < 1:3391592‑M1/97‑1 (MQ=255) tcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAg < 2:686075‑M1/99‑1 (MQ=255) cagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATa < 1:1598094‑M1/106‑1 (MQ=255) ggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATa < 2:1921269‑M1/106‑1 (MQ=255) tccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGc > 2:1868921‑M1/26‑134 (MQ=255) ttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGc > 1:1470629‑M1/25‑133 (MQ=255) ttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGc > 2:534641‑M1/25‑133 (MQ=255) ttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGc > 2:1755749‑M1/25‑133 (MQ=255) ccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCgg > 1:2442291‑M1/25‑135 (MQ=255) taacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAATTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCAGAAGCAAAATAGGCGGACg < 1:3185476‑M1/114‑1 (MQ=255) taacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACg < 2:869781‑M1/114‑1 (MQ=255) ggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGcc < 1:20886‑M1/117‑1 (MQ=255) acaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGcc > 2:408497‑M1/19‑135 (MQ=255) gtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGcc > 1:3345011‑M1/18‑134 (MQ=255) actctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCACAATAGGCGGACGGCCATaaa < 1:1878081‑M1/122‑1 (MQ=255) actctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATaaa < 2:471046‑M1/122‑1 (MQ=255) actctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATaaa < 2:3321504‑M1/122‑1 (MQ=255) actctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATaaa < 1:2992050‑M1/122‑1 (MQ=255) tctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATaaa < 2:3096195‑M1/122‑1 (MQ=255) agttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgt < 1:1072909‑M1/36‑1 (MQ=255) caaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCtt > 1:1151128‑M1/9‑135 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAGAATAGGCGGACGGCCATAAAATCTTTGAt < 2:2800744‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 1:2592646‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 2:2691946‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 2:2510141‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 1:716178‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 1:1417042‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 2:1457248‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACAGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 2:1226664‑M1/131‑1 (MQ=255) actTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAtt < 2:2620180‑M1/132‑1 (MQ=255) actTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAtt < 1:616859‑M1/132‑1 (MQ=255) aaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGACGGCTATAAAATCTTTGAtt < 2:3434479‑M1/132‑1 (MQ=255) aaaTTTGTTCATTGAAAACTGGATAGTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGACGGCTATAAAATCTTTGAtt < 1:3508266‑M1/132‑1 (MQ=255) tttGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGATTTTa < 1:869781/135‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGATTTTA > AssemblyC74_contig_31/1‑135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |