| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_40 | 1 = | 0 (0.000) | 945 (0.900) | 118/248 | 0.0 | 100% | intergenic (–/+180) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Cold shock protein of CSP family |
| ? | AssemblyC74_contig_45 | 1 = | 0 (0.000) | coding (906/906 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Integrase, catalytic region | |||||
Only 100 of 945 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATA‑‑TTA‑TAATAATT‑TTATTTGCTCCTTAATTAGTAACGAACTACTCTAAATTGCTAGCAATAATTACGGT > AssemblyC74_contig_40/1‑129 | attcaaacggactcctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccat < 2:3127632‑M1/1‑1 (MQ=255) tcaaacggactcctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcttccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTa < 2:241972‑M1/3‑1 (MQ=255) tcaaacggactcctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctataaaatcactaaattaccaaacaccaTTa < 1:3203761‑M1/3‑1 (MQ=255) tcaaacggactcctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTa > 1:1260385‑M1/133‑135 (MQ=255) tcaaacggactcctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTa < 1:1422788‑M1/3‑1 (MQ=255) tcaaacggactcctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTa < 2:3603796‑M1/3‑1 (MQ=255) ggactcctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGtt > 1:1850424‑M1/127‑135 (MQ=255) cctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGttttttt < 1:1104970‑M1/14‑1 (MQ=255) cctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGttttttt < 2:1372979‑M1/14‑1 (MQ=255) cctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGttttttt > 1:2030582‑M1/122‑135 (MQ=255) ctccgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTg > 2:3560186‑M1/121‑135 (MQ=255) ctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTg > 1:3381456‑M1/121‑135 (MQ=255) ctacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTg > 2:173766‑M1/121‑135 (MQ=255) tccgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGa < 1:1670830‑M1/16‑1 (MQ=255) tacgaaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGa < 1:3726519‑M1/16‑1 (MQ=255) aaaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTa < 1:45646‑M1/20‑1 (MQ=255) aaagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTAc < 2:1411713‑M1/21‑1 (MQ=255) aagatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACg > 1:2746487‑M1/114‑135 (MQ=255) gatggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTa < 2:372978‑M1/24‑1 (MQ=255) tggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTaaa < 2:1557044‑M1/26‑1 (MQ=255) tggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtcaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt < 1:3258231‑M1/27‑1 (MQ=255) ggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 1:646346‑M1/109‑135 (MQ=255) ggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 1:678471‑M1/109‑135 (MQ=255) ggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 1:2525701‑M1/109‑135 (MQ=255) ggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 1:181262‑M1/109‑135 (MQ=255) ggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 2:3368822‑M1/109‑135 (MQ=255) ggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 2:3283943‑M1/109‑135 (MQ=255) ggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 2:768251‑M1/109‑135 (MQ=255) ggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 1:1474299‑M1/109‑135 (MQ=255) ggactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 1:1372979‑M1/109‑135 (MQ=255) gactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGtt > 1:100452‑M1/108‑116 (MQ=255) gactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATg < 2:2184502‑M1/28‑1 (MQ=255) gactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATg < 2:1157733‑M1/28‑1 (MQ=255) gactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATg < 1:1164104‑M1/28‑1 (MQ=255) gactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATg < 1:1624105‑M1/28‑1 (MQ=255) gactaccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATg < 2:577961‑M1/28‑1 (MQ=255) taccaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGaa < 1:3484841‑M1/31‑1 (MQ=255) accaaaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGaaa < 1:2086549‑M1/32‑1 (MQ=255) aaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGttt < 2:2651726‑M1/36‑1 (MQ=255) aaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGttt > 1:3797751‑M1/100‑135 (MQ=255) aaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGttt > 2:277641‑M1/100‑135 (MQ=255) aaagaaatggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGttt < 2:2266485‑M1/36‑1 (MQ=255) atggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGtc > 1:1063795‑M1/94‑133 (MQ=255) tggaattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCg > 2:510019‑M1/93‑135 (MQ=255) aattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCtt < 1:2382053‑M1/46‑1 (MQ=255) aattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCtt < 1:53778‑M1/46‑1 (MQ=255) aattcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCtt < 2:11007‑M1/46‑1 (MQ=255) ttcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTa > 1:2667901‑M1/88‑134 (MQ=255) ttcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTa > 2:2376537‑M1/88‑134 (MQ=255) tcaaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAAt > 1:3300273‑M1/87‑135 (MQ=255) caaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAAtt > 2:2501504‑M1/86‑135 (MQ=255) caaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAAtt > 2:1049477‑M1/86‑135 (MQ=255) aaccaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAAttt < 1:2280149‑M1/51‑1 (MQ=255) accaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTg > 1:932918‑M1/84‑135 (MQ=255) accaagtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTg > 1:2929621‑M1/84‑135 (MQ=255) agtcaatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACaa > 2:414597‑M1/80‑135 (MQ=255) caatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAaata < 1:2210382‑M1/59‑1 (MQ=255) aatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAaataa < 1:3101184‑M1/60‑1 (MQ=255) aatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAaata > 2:3064538‑M1/76‑134 (MQ=255) aatcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGATTTGTCTCGCTTAATTTGACAaataa > 2:1931442‑M1/76‑135 (MQ=255) atcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAaataat < 2:701098‑M1/61‑1 (MQ=255) atcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAaataat < 1:2862074‑M1/61‑1 (MQ=255) tcaaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAataata > 2:1467048‑M1/74‑135 (MQ=255) aaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGttt > 2:2905141‑M1/72‑107 (MQ=255) aaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACaaataataga < 2:2047383‑M1/64‑3 (MQ=255) aaggattcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAAta‑‑tt < 2:1780741‑M1/64‑1 (MQ=255) tcatctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 1:244447‑M1/66‑92 (MQ=255) catctcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTtgacaaataatagattaa < 1:776727‑M1/68‑7 (MQ=255) ctcatccgttgagtccaaaagaaaacatatccctagaaaatcacgaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 2:1633139‑M1/62‑88 (MQ=255) tcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTa > 1:3592389‑M1/61‑80 (MQ=255) tcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGtttt > 2:3414942‑M1/61‑97 (MQ=255) tcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACaaa > 1:2178574‑M1/61‑117 (MQ=255) tcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAaata < 1:385508‑M1/59‑1 (MQ=255) tcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATa‑‑gtaataataaat < 2:133497‑M1/74‑3 (MQ=255) tcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATa‑‑gtaataataaat < 2:2097760‑M1/74‑3 (MQ=255) tcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATa‑‑gtaataataaat < 1:3936015‑M1/74‑3 (MQ=255) tcatccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATA‑‑TTA‑TAATAAtt‑tt < 1:844623‑M1/75‑1 (MQ=255) tccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATA‑‑TTA‑TAATAATT‑TTAtt > 1:3634791‑M1/58‑135 (MQ=255) tccgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATA‑‑TTA‑TAATAATT‑TTAtt > 1:367204‑M1/58‑135 (MQ=255) cgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTg < 2:3764455‑M1/15‑1 (MQ=255) cgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAAtt > 2:659867‑M1/56‑105 (MQ=255) cgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTgacaaataatagaatt > 2:2999574‑M1/56‑117 (MQ=255) cgttgcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTgacaaataatagaatt < 1:2999574‑M1/67‑6 (MQ=255) gcgtccaaaagaaaccatatccctagaacatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATAGATTA‑AAATAATTATTatttt > 2:3810923‑M1/52‑133 (MQ=255) gcgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATAGATTA‑AAATAATTATTatttt > 2:322947‑M1/52‑133 (MQ=255) cgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAAt < 2:3647834‑M1/49‑1 (MQ=255) cgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATAGATTA‑AAATAATTATtatttta < 1:3755572‑M1/84‑3 (MQ=255) cgtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATA‑‑TTA‑TAATAATT‑TTATTTGCTCCt < 2:1215988‑M1/85‑1 (MQ=255) gtccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATAGATTA‑AAATAATTAttattttaat < 1:2576002‑M1/86‑5 (MQ=255) tccaaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATAGATTA‑AAATAATtattattttaatc < 2:3897883‑M1/87‑6 (MQ=255) aaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACaaa > 2:1845576‑M1/46‑102 (MQ=255) aaaagaaaccatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATA‑‑TTA‑TAATAATT‑TTATTTGCTCCTTAAtt < 1:3420392‑M1/90‑1 (MQ=255) accatatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATA‑‑TTA‑TAATAATT‑TTATTTGCTCCTTAATTAGTAAc > 2:844623‑M1/39‑134 (MQ=255) atatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAAt > 1:1935612‑M1/36‑62 (MQ=255) atatccctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATA‑‑TTA‑TAATAATT‑TTATTTGCTCCTTAATTAGTAACGAac < 1:1748079‑M1/100‑1 (MQ=255) cctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAAt > 1:3541943‑M1/31‑79 (MQ=255) cctagaaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAaataat > 2:2704332‑M1/31‑91 (MQ=255) aaaatcactaaattaccaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAaataatag < 2:3517410‑M1/63‑2 (MQ=255) accaaacaccaTTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATA‑‑TTA‑TAATAATT‑TTATTTGCTCCTTAATTAGTAACGAACTACTCTAAATTGCTAGCAATAAtt > 2:2589350‑M1/12‑135 (MQ=255) acaccaTGAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATA‑‑TTA‑TAATAATT‑TTATTTGCTCCTTAATTAGTAACGAACTACTCTAAATTGCTAGCAATAATTACGGt > 2:1670830‑M1/7‑135 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGAAGTTTTTTTGAGTTACGTAAATGGAAAGTTTTGTCTCGCTTAATTTGACAAATAATA‑‑TTA‑TAATAATT‑TTATTTGCTCCTTAATTAGTAACGAACTACTCTAAATTGCTAGCAATAATTACGGT > AssemblyC74_contig_40/1‑129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |