| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_14 | = 91033 | 0 (0.000) | 271 (0.860) | 85/260 | 0.1 | 100% | intergenic (+263/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_35 | 1 = | 0 (0.000) | intergenic (–/‑99) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Mobile element protein | |||||
Only 100 of 446 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATAAAAGAACGTGAAA > TrimmedAssembly_T66_contig_35/1‑136 | atgcagctaataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGa < 2:1399202‑M2/5‑1 (MQ=255) tatcggtttcgattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAAt < 2:1553632‑M2/7‑1 (MQ=255) gcagctaataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGcgact > 1:508674‑M2/130‑134 (MQ=255) aataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACaa > 1:793705‑M2/124‑136 (MQ=255) aataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACaa < 1:236857‑M2/13‑1 (MQ=255) ttcgattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACaa < 1:1109115‑M2/13‑1 (MQ=255) ttcgattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACaa < 2:1207339‑M2/13‑1 (MQ=255) ataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAAt > 1:697838‑M2/123‑136 (MQ=255) ataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgaggtttcctactccttgaccacaacatccgctgaggtggtggctattttattgccgGGCGAATTTACAAt > 2:2334253‑M2/123‑136 (MQ=255) gattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGa > 2:964010‑M2/120‑136 (MQ=255) gattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGa > 1:2200513‑M2/120‑136 (MQ=255) tcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGaa < 1:242704‑M2/18‑1 (MQ=255) ttaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGaa < 2:2511599‑M2/18‑1 (MQ=255) tcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCa > 1:892538‑M2/113‑135 (MQ=255) cattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATTCAac > 2:856592‑M2/112‑136 (MQ=255) gcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACaaa > 2:2035229‑M2/107‑136 (MQ=255) atagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACaaa > 2:2386231‑M2/107‑136 (MQ=255) gtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGt > 2:1513928‑M2/105‑136 (MQ=255) ctcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaa > 2:2165220‑M2/102‑136 (MQ=255) tcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactccatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa < 1:2035911‑M2/36‑1 (MQ=255) aagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa < 1:1423712‑M2/36‑1 (MQ=255) aagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa > 2:1840051‑M2/101‑136 (MQ=255) agatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaa > 2:117677‑M2/100‑136 (MQ=255) agatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaa > 2:1809090‑M2/100‑136 (MQ=255) cccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaaaa > 1:207862‑M2/98‑136 (MQ=255) cccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaaaa > 1:1851291‑M2/98‑136 (MQ=255) cccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa > 1:1726689‑M2/98‑133 (MQ=255) tacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaaa < 1:1556593‑M2/38‑1 (MQ=255) caagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATa > 1:2058474‑M2/96‑136 (MQ=255) caagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATa > 1:2‑M2/96‑136 (MQ=255) caagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATa > 2:1299626‑M2/96‑136 (MQ=255) caagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATa > 2:24772‑M2/96‑136 (MQ=255) caagtctgatgaatggggttcatcaaagcccccactttgatggttcctactccttgaccactacatccgctgatgtggtgggttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTCAAAAAATa > 2:559534‑M2/96‑136 (MQ=255) acggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATa < 2:24185‑M2/41‑1 (MQ=255) ctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc < 1:2386231‑M2/46‑1 (MQ=255) tgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCa > 1:840061‑M2/90‑136 (MQ=255) gaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc < 2:1720828‑M2/51‑1 (MQ=255) gaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc < 2:1064580‑M2/51‑1 (MQ=255) gaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc < 2:892538‑M2/51‑1 (MQ=255) aatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCg > 2:1674224‑M2/85‑136 (MQ=255) aatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCg < 2:738853‑M2/52‑1 (MQ=255) ggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAg > 1:1530193‑M2/80‑136 (MQ=255) gattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAat > 2:2545272‑M2/77‑136 (MQ=255) atcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGActat > 2:1975131‑M2/75‑136 (MQ=255) atcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAatat > 1:1662091‑M2/75‑136 (MQ=255) ccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGt < 1:1046691‑M2/64‑1 (MQ=255) aaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGtt > 1:1025453‑M2/72‑136 (MQ=255) gaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTaa < 2:280037‑M2/68‑1 (MQ=255) gaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTaa < 2:177391‑M2/68‑1 (MQ=255) ccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACg > 1:1823556‑M2/67‑136 (MQ=255) aggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACg > 2:1477431‑M2/67‑136 (MQ=255) ccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGa > 2:539509‑M2/65‑135 (MQ=255) ccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGa > 1:2563663‑M2/65‑135 (MQ=255) tttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATc > 2:2228637‑M2/59‑136 (MQ=255) gtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAAc < 2:791612‑M2/82‑1 (MQ=255) gtttcctactccttgaccactacatacgcttatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAAc < 1:738325‑M2/82‑1 (MQ=255) tttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACa > 2:2299619‑M2/54‑136 (MQ=255) catcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAAt > 2:2064638‑M2/52‑136 (MQ=255) ctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTc < 1:360406‑M2/87‑1 (MQ=255) tactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATtct > 1:1314313‑M2/49‑135 (MQ=255) tactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGAACAAATCAAACAATTCg > 2:1655617‑M2/49‑136 (MQ=255) ataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAg > 1:1056366‑M2/47‑136 (MQ=255) ataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAg > 1:1907465‑M2/47‑136 (MQ=255) tccttgaccactacctccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAgg < 1:2164564‑M2/91‑1 (MQ=255) tccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAgg < 1:1164034‑M2/91‑1 (MQ=255) tccttgaccactacatccgctgatgtggtggcttttttatcgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAgg < 1:1681697‑M2/91‑1 (MQ=255) taagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAgg < 1:1369430‑M2/91‑1 (MQ=255) ttccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 1:223821‑M2/98‑1 (MQ=255) ttccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 1:599638‑M2/98‑1 (MQ=255) ttccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 1:968130‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAACGTAAAAAAATAAACCCATACCGGGTAGACTATGTTTAACGACCAACTCAAACAATTCGAGGTATCCgg < 1:2334253‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa > 2:1883509‑M2/39‑74 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:1925218‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:345565‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:6600‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:1053774‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:1239331‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg > 1:633613‑M2/39‑136 (MQ=255) cactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGt > 2:400198‑M2/38‑136 (MQ=255) actacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGATGTATCAGGTa > 1:1959009‑M2/37‑136 (MQ=255) ctacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTAt < 1:887755‑M2/101‑1 (MQ=255) ctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAATTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGATGTATCCGGTATGAGCTATaa > 1:2135031‑M2/27‑136 (MQ=255) ggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc > 2:2125578‑M2/26‑76 (MQ=255) atgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa > 1:1793418‑M2/24‑136 (MQ=255) atgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa > 2:825401‑M2/24‑136 (MQ=255) tgttgtgtcttttttattgcagGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa < 1:2289891‑M2/113‑1 (MQ=255) gtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa < 2:473921‑M2/113‑1 (MQ=255) gtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa < 1:564424‑M2/113‑1 (MQ=255) atagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACt > 2:713852‑M2/17‑136 (MQ=255) gcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACta > 1:2520920‑M2/16‑136 (MQ=255) gcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACta > 2:764344‑M2/16‑136 (MQ=255) gcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAAAATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACta > 1:1646284‑M2/16‑136 (MQ=255) gttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc > 1:484861‑M2/14‑64 (MQ=255) gttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACtata > 2:1428032‑M2/14‑136 (MQ=255) tttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACTACCAAATCAAACAATTCGAGGTATCCGGTATGAGATATAAACATCTTACTATaa < 2:1313214‑M2/124‑1 (MQ=255) tttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATaaa < 2:1030603‑M2/125‑1 (MQ=255) ttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACTATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATaaa < 1:423742‑M2/125‑1 (MQ=255) ttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATaaa < 1:1260386‑M2/125‑1 (MQ=255) ttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATaaa < 2:329451‑M2/125‑1 (MQ=255) ttgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATAAAAGAAc < 2:589488‑M2/130‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATAAAAGAACGTGAAA > TrimmedAssembly_T66_contig_35/1‑136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |