| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_27 | = 3273 | 0 (0.000) | 260 (0.650) | 75/262 | 0.0 | 100% | intergenic (‑110/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Adenine specific DNA methylase Mod/– |
| ? | TrimmedAssembly_T66_contig_41 | 1 = | 0 (0.000) | intergenic (–/‑2) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Mobile element protein | |||||
Only 100 of 262 total aligned reads displayed.
GAAATTAAAAAGCCCAAAGCAATCACTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_27/3138‑3273 | aaaGCCCAAAGCAATCACTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatct < 1:641387‑M1/136‑9 (MQ=255) aaaGCCCAAAGCAATCACTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatct < 2:480815‑M1/136‑9 (MQ=255) aaGCCCACAGCAATCACATACAATGGGAGTAGCTAATTCCAACCACTATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCACTGAGGGGAataaatctt < 2:2172467‑M1/136‑10 (MQ=255) aaGCCCAAAGCAATCACTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatctt < 1:2527611‑M1/136‑10 (MQ=255) aaGCCCAAAGCAATCACTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatctt > 2:957932‑M1/1‑127 (MQ=255) aaTCACTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatg < 1:2072449‑M1/136‑21 (MQ=255) aaTCACTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatg < 1:1952149‑M1/136‑21 (MQ=255) tCACTTACAATGGTTGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggc < 2:1358176‑M1/136‑23 (MQ=255) tCACTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggc < 1:439692‑M1/136‑23 (MQ=255) tCACTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAagaaatcttaccaagtaatggc < 2:2279186‑M1/136‑23 (MQ=255) tCACTTACAATGGTAGTAGCTAATTCAAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggc < 1:1692970‑M1/136‑23 (MQ=255) aCTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAAGGAGGGGAataaatcttaccaagtaatggctg > 2:743013‑M1/1‑112 (MQ=255) cTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGActaaatcttaccaagtaatggctg > 2:2122811‑M1/1‑111 (MQ=255) cTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctg > 1:1478739‑M1/1‑111 (MQ=255) cTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctg > 1:2460738‑M1/1‑111 (MQ=255) cTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctg > 2:1088642‑M1/1‑111 (MQ=255) cTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctg > 1:2004963‑M1/1‑111 (MQ=255) gtagCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcg > 1:1727082‑M1/1‑99 (MQ=255) gtagCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatg > 2:1026722‑M1/1‑99 (MQ=255) gtagCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatg < 1:1026722‑M1/119‑21 (MQ=255) tagCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatct < 1:161692‑M1/106‑9 (MQ=255) agCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtc > 2:583187‑M1/1‑97 (MQ=255) aaTTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaa > 2:2375524‑M1/1‑93 (MQ=255) aaTTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaa > 2:502775‑M1/1‑93 (MQ=255) aaTTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaa > 2:1875703‑M1/1‑93 (MQ=255) aTTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaa < 1:471952‑M1/136‑45 (MQ=255) ccaaccaaTATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagct > 1:2323180‑M1/1‑89 (MQ=255) caaccaaTATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagcta < 2:2233113‑M1/136‑49 (MQ=255) caaccaaTATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagct > 2:1736135‑M1/1‑88 (MQ=255) aaccaaTCTAGGGAGTGATTACTTTGGGTACATCTACTGTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAagaaatcgtaccaagtaatggctgacgccttaggcgtcgccaaagctac < 2:989033‑M1/136‑50 (MQ=255) aaccaaTATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctac < 2:259180‑M1/136‑50 (MQ=255) aaccaaTATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctac < 2:2496805‑M1/136‑50 (MQ=255) accaaTATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacg < 1:191260‑M1/136‑51 (MQ=255) aaTATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgatt > 1:2091435‑M1/1‑83 (MQ=255) aaTATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgatt > 1:2210298‑M1/1‑83 (MQ=255) aaTATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgatt > 2:177367‑M1/1‑83 (MQ=255) atatAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgatta < 1:1378811‑M1/136‑55 (MQ=255) atatAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgatta < 1:701048‑M1/136‑55 (MQ=255) tGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcg < 1:2278151‑M1/111‑40 (MQ=255) gATTACTTTGGGTACATCTCCTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatgtctgacgccttaggcgtcgccaaagctacgattagctatgagttg < 1:861141‑M1/136‑66 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg < 2:616503‑M1/136‑66 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg > 1:1125876‑M1/1‑71 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg < 1:2345280‑M1/136‑66 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg < 1:83906‑M1/136‑66 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg < 1:1161560‑M1/136‑66 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg < 1:932327‑M1/136‑66 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg < 2:1393624‑M1/136‑66 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg > 1:1010454‑M1/1‑71 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg < 2:1291000‑M1/136‑66 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagtt < 2:1931713‑M1/135‑65 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagtt < 2:1530822‑M1/135‑65 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagtt < 2:2331444‑M1/135‑65 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagtt < 2:2091435‑M1/135‑65 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagtt < 2:1194055‑M1/135‑65 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagtt < 1:962977‑M1/135‑65 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagtgg < 2:1257941‑M1/136‑66 (MQ=255) gATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGACAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg < 2:1681692‑M1/136‑66 (MQ=255) aCTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggacc > 1:1413703‑M1/1‑67 (MQ=255) aCTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggacc > 1:1351600‑M1/1‑67 (MQ=255) gTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaag > 2:164399‑M1/1‑60 (MQ=255) tACATCTACGTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATCAGGGGAataaatcttacaaagtaatggctgacgccttaggcgtcgccaaagctaagattagctatgagatggacctggttaa > 2:345554‑M1/1‑59 (MQ=255) cATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaacc < 2:685046‑M1/136‑80 (MQ=255) cATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaacc < 1:1609313‑M1/136‑80 (MQ=255) aTCGACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaacct < 1:1033404‑M1/136‑81 (MQ=255) tACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttat > 1:2487096‑M1/1‑53 (MQ=255) tACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagtaggaccgggttaaaccttat > 1:661258‑M1/1‑53 (MQ=255) tACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgatta < 1:1831483‑M1/107‑55 (MQ=255) tACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgatta > 2:2463833‑M1/1‑53 (MQ=255) cTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatga < 2:868631‑M1/136‑86 (MQ=255) atttaTCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatga < 2:525501‑M1/135‑86 (MQ=255) tATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtcatggctgacgccttaggcgtcgccacagctacgattagctatgagttggaccgggttaaaccttatgatca > 2:2294447‑M1/1‑48 (MQ=255) tATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatcc > 2:2380489‑M1/1‑48 (MQ=255) tATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatcc > 2:395451‑M1/1‑48 (MQ=255) tATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatcc > 1:271672‑M1/1‑48 (MQ=255) tATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatcc > 1:285064‑M1/1‑48 (MQ=255) tATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatcc > 1:522482‑M1/1‑48 (MQ=255) cGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaat > 1:80932‑M1/1‑43 (MQ=255) cGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaat > 2:1633808‑M1/1‑43 (MQ=255) cGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaat > 2:1504189‑M1/1‑43 (MQ=255) tCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg > 1:2436121‑M1/1‑38 (MQ=255) tCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttg < 2:2436121‑M1/103‑66 (MQ=255) aaCGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctca < 2:43923‑M1/136‑101 (MQ=255) aaCGTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctca < 2:837575‑M1/136‑101 (MQ=255) gTGGCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagca < 1:1146079‑M1/136‑104 (MQ=255) ggCGCACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaag < 1:1302592‑M1/136‑106 (MQ=255) cgcACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagat > 2:2021158‑M1/1‑29 (MQ=255) cgcACTAGCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagat > 1:874549‑M1/1‑29 (MQ=255) gCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagatgcagatc > 2:1606158‑M1/1‑22 (MQ=255) gCACAACTGGTCAATGAGGGGAataaatcttaccaagtaatg < 2:1972363‑M1/42‑21 (MQ=255) aCTGGTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagatgcagatcgcaaa < 1:331325‑M1/136‑120 (MQ=255) gTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagatgcagatcgcaaaaggc > 2:18503‑M1/1‑13 (MQ=255) gTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagatgcagatcgcaaaaggc > 2:1987830‑M1/1‑13 (MQ=255) gTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagatgcagatcgcaaaaggc > 1:72781‑M1/1‑13 (MQ=255) gTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagatgcagatcgcaaaaggc > 2:499934‑M1/1‑13 (MQ=255) gTCAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagatgcagatcgcaaaaggc > 1:963159‑M1/1‑13 (MQ=255) cAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagatgcagatcgcaaaaggcgg > 1:1268527‑M1/1‑11 (MQ=255) cAATGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagatgcagatcgcaaaaggcgg > 2:416794‑M1/1‑11 (MQ=255) aTGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagct < 1:1060315‑M1/107‑99 (MQ=255) aTGAGGGGAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagct > 2:1060315‑M1/1‑9 (MQ=255) ggggAataaatcttaccaagtaatggctgacgccttaggcgtcgccaaagctacgattagctatgagttggaccgggttaaaccttatgatccagaattagctcagcaagatgcagatcgcaaaaggcggacttgc > 1:514667‑M1/1‑5 (MQ=255) | GAAATTAAAAAGCCCAAAGCAATCACTTACAATGGTAGTAGCTAATTCCAACCAATATAGGGAGTGATTACTTTGGGTACATCTACTTTATCACGTTTTCAACGTGGCGCACTAGCACAACTGGTCAATGAGGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_27/3138‑3273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |