| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_27 | = 3273 | 0 (0.000) | 260 (0.650) | 75/262 | 0.0 | 100% | intergenic (‑110/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Adenine specific DNA methylase Mod/– |
| ? | TrimmedAssembly_T66_contig_41 | 1 = | 0 (0.000) | intergenic (–/‑2) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Mobile element protein | |||||
Only 100 of 647 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGGTCG > TrimmedAssembly_T66_contig_41/1‑136 | aagcccaaagcaatcacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCt < 1:2271207‑M2/8‑1 (MQ=255)aaagcccaaagcaatcacttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCt < 1:641387‑M2/8‑1 (MQ=255)aaagcccaaagcaatcacttacaatggtagtagctaagtccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCt < 2:977698‑M2/8‑1 (MQ=255) agcccaaagcaatcacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacttctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCtt < 2:1334469‑M2/9‑1 (MQ=255) gcaatcacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTa > 2:582850‑M2/120‑136 (MQ=255) atcacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATg < 1:27513‑M2/20‑1 (MQ=255) tctattacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatctcgttttcaacgtggcgcactcgcacaactggtcaatgtggggcATAAATCTTACCAAGTAATgg < 2:1889496‑M2/21‑1 (MQ=255) tcacttacaatggtagtaactaattccaaccaactagagggagtgattactttgggtacatctactgtatcacgttttcaacgtggcgcacgagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATgg < 2:1687248‑M2/21‑1 (MQ=255) tcacttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGc < 1:439692‑M2/22‑1 (MQ=255) tcacttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgtattcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGc < 2:2377464‑M2/22‑1 (MQ=255) cacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGc < 1:1516523‑M2/22‑1 (MQ=255) cacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGc < 1:1995343‑M2/22‑1 (MQ=255) cttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCt < 2:341676‑M2/8‑1 (MQ=255) cttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTg > 1:675982‑M2/113‑136 (MQ=255) cttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTg > 1:2214351‑M2/113‑136 (MQ=255) cttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTg > 2:1088642‑M2/112‑135 (MQ=255) cttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTg > 2:932327‑M2/112‑135 (MQ=255) atggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCt > 2:1056403‑M2/107‑136 (MQ=255) gtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCg > 1:1727082‑M2/100‑135 (MQ=255) aactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTc > 2:2465407‑M2/99‑136 (MQ=255) aattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCa > 1:988889‑M2/95‑136 (MQ=255) aattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCa > 1:1108272‑M2/95‑136 (MQ=255) aattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCaa > 2:502775‑M2/94‑136 (MQ=255) ccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCaaa > 1:908111‑M2/91‑134 (MQ=255) ccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCt > 1:1030477‑M2/90‑136 (MQ=255) caaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCt > 2:1209150‑M2/90‑136 (MQ=255) caaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTa < 2:2233113‑M2/48‑1 (MQ=255) aaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTa < 1:2053690‑M2/48‑1 (MQ=255) aaacaactatagggagtgtttactttgggtacatctactttatcacgttttcaacgtggcgcactatcacaacttgtcaatgatgtgcATAAAACTTACCAAGTAATGGCTGACGCATTAGGCGTCGCCAAAGCTa < 1:1003491‑M2/48‑1 (MQ=255) accaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTAc < 2:1145716‑M2/49‑1 (MQ=255) accaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTAc < 1:1682544‑M2/49‑1 (MQ=255) aaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTAc < 2:259180‑M2/49‑1 (MQ=255) aatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGAtt > 1:2091435‑M2/84‑136 (MQ=255) aatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGAtt > 1:717455‑M2/84‑136 (MQ=255) ctatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 1:2405325‑M2/54‑1 (MQ=255) atatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 2:626221‑M2/54‑1 (MQ=255) atatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 2:717455‑M2/54‑1 (MQ=255) atagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTAc < 1:1364007‑M2/49‑1 (MQ=255) gattactttggttacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 2:1821344‑M2/72‑136 (MQ=255) gattactttgggtacatctcctttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGTCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:861141‑M2/65‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGtt < 2:1985179‑M2/64‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:1066721‑M2/65‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 1:1156942‑M2/72‑136 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:1615458‑M2/65‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 2:1479095‑M2/65‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 1:949661‑M2/72‑136 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:493682‑M2/65‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAATTCTTACCAAGTAATGTCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 2:2435788‑M2/72‑136 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGtt < 2:1931713‑M2/64‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGtt < 2:2091435‑M2/64‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:2345280‑M2/65‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:1920133‑M2/65‑1 (MQ=255) gattactttgggtacaactactatatcacgttaacaacgtggcgcactagcaccactggtcaatgaggggcATAAATCTTTCCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:1477297‑M2/65‑1 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactgttcaatgaggggcATAAATCTTACCAAGAAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATTAGTTgg > 2:1387286‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa > 2:1624430‑M2/70‑123 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 1:2302761‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 2:557086‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 2:1562564‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 2:2127119‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 2:83482‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:577568‑M2/65‑1 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgaactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTtgt > 1:528887‑M2/70‑134 (MQ=255) tactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGa > 1:351206‑M2/69‑135 (MQ=255) tactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGa > 1:813390‑M2/69‑135 (MQ=255) actttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGAcc > 1:2436297‑M2/68‑136 (MQ=255) actttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGAcc > 1:1413703‑M2/68‑136 (MQ=255) gtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAg < 1:164399‑M2/15‑1 (MQ=255) catctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAAcc < 1:2141070‑M2/79‑1 (MQ=255) tactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTAt > 2:1253966‑M2/54‑136 (MQ=255) tactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTCCGATTAGCTATGAGTTGGACCGGGTTAAACCTTAt > 2:2029321‑M2/54‑136 (MQ=255) tactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 1:1831483‑M2/54‑1 (MQ=255) actttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTata > 1:1295783‑M2/53‑135 (MQ=255) actttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATg < 1:2479799‑M2/84‑1 (MQ=255) actttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATg < 2:770205‑M2/84‑1 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATcc > 2:395451‑M2/49‑136 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATcc > 2:476621‑M2/49‑136 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATcc > 2:1288757‑M2/49‑136 (MQ=255) tcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAg > 2:1021170‑M2/47‑136 (MQ=255) acgttttcaacgtggcgcactcgcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGaa > 2:2283167‑M2/45‑136 (MQ=255) tttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTa < 1:898518‑M2/95‑1 (MQ=255) tttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTa < 1:177400‑M2/95‑1 (MQ=255) tttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTa < 2:864198‑M2/95‑1 (MQ=255) tttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTa < 2:1752392‑M2/95‑1 (MQ=255) tcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGc > 1:1889557‑M2/39‑135 (MQ=255) cactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGc > 1:1239628‑M2/28‑136 (MQ=255) gcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATc > 2:1606158‑M2/23‑136 (MQ=255) acaacgggtcaatgaggggaATAACTCTAACCAAGTACTGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTAGGATCCAGAATTAGCTCAGCAAGATGCAGATc < 2:2309139‑M2/114‑1 (MQ=255) actggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCaaa < 1:331325‑M2/119‑1 (MQ=255) gtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGc > 1:2520161‑M2/14‑136 (MQ=255) gtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTAAGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGc > 1:1190272‑M2/14‑136 (MQ=255) caatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCgg > 1:2506894‑M2/12‑136 (MQ=255) aatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGa > 2:1650327‑M2/11‑136 (MQ=255) atgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGaa > 2:2189241‑M2/10‑136 (MQ=255) atgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGaa > 1:780920‑M2/10‑136 (MQ=255) ggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGc > 2:432091‑M2/6‑136 (MQ=255) ggggaATAAATCTTACCAAGTAATGGCTGACGCCtt > 2:2510037‑M2/6‑36 (MQ=255) gcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCgg < 1:1962685‑M2/133‑1 (MQ=255) aTAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGgtcg > 1:1315714/1‑136 (MQ=255) aTAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGgtcg > 1:431763/1‑136 (MQ=255) aTAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGgtcg > 1:286081/1‑136 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGGTCG > TrimmedAssembly_T66_contig_41/1‑136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |