| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_28 | = 3183 | 0 (0.000) | 298 (0.390) +TGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCG |
68/178 | 1.3 | 100% | intergenic (‑135/–) | rasttk_feature_creation_tool=RNA_reps_LSU_rRNA/– | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/– |
| ? | TrimmedAssembly_T66_contig_32 | = 1640 | 0 (0.000) | intergenic (+24/–) | rasttk_feature_creation_tool=RNA_reps_SSU_rRNA/– | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/– | |||||
Only 100 of 553 total aligned reads displayed.
TTACCTAACGGTAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_28/3051‑3183‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGGTTCCTAAAAGGTTACCCCACCG < TrimmedAssembly_T66_contig_32/1640‑1507 ||||||||||||||||||||||||||||||||||||||||| TACCTAATGGTAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAG > 2:680143/1‑136 TACCTAACGGTAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAG > 1:2843231/1‑136 TAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATC > 1:754135/1‑135 TAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATC > 1:1996428/1‑135 CGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAA > 1:1079118/1‑136 AATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAA < 2:2443964/136‑1 AATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAA < 2:2546335/136‑1 AATGAGTTTAGCGATAAATAAACTTCAATAAAAAACACAAAAAACGCGGTGTTCTCGTTTTCATTATTAAAAAATATATTAGATATTATCTAGTATTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAA > 2:1469302/1‑136 ATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAA > 2:461296/1‑135 TGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAAC < 2:976453/136‑1 TTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGT < 2:2694042/136‑1 AGCGATAATTAAACTTCAATAAAAAACTCAAACAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTT < 2:1885411/136‑1 AGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTT < 1:2552127/136‑1 AGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTT < 1:1112618/136‑1 AGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTT > 1:2098040/1‑135 AGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTT > 1:2186708/1‑135 CGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCG > 1:2043905/1‑136 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAGAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 2:385901/134‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGA < 2:123315/136‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCG < 1:728413/135‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCG < 1:2158614/135‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 1:86204/134‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 1:1000632/134‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 2:2258006/134‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 2:228715/134‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 2:1161991/134‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 1:1636333/134‑1 TAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACG < 1:2227769/136‑1 ATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATC > 2:720841/1‑108 TTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGT < 2:2314259/136‑1 AAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACTAAGTTTCGACGCGTGT > 1:2674086/1‑136 AAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGT > 1:2782100/1‑136 AAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGT > 1:1267350/1‑136 AAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGT > 2:171106/1‑136 CTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTA < 1:2464146/136‑1 CTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTA < 2:204164/136‑1 TCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGG < 1:1502100/136‑1 TAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTT > 1:2450174/1‑135 TAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTT > 1:531600/1‑135 CAAACACCGCGGTGGTCTCGGTTTCATTATGAAAAAATATATTTGATATGATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGGTTCGACGCGTGTGTAGGTTTCCGTAATATT < 2:1638056/136‑1 CAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATT < 2:2186708/136‑1 AAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTT < 2:863365/136‑1 cACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTA < 2:28079/135‑1 ACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAG < 2:777430/136‑1 CTCGGTTTCTTTTTGAAAAAATATATTTGTTCTTATCTAGTTTTCATATAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAATCAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGT < 1:1153201/135‑1 TTATGAAAAAATATATTTGATATTATCTAGTTTTCAAATAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGC < 1:415891/136‑1 TATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCA > 1:1565405/1‑136 TATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCA > 1:993127/1‑136 TATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCA < 2:1791924/136‑1 TATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCA > 1:891391/1‑136 TATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCA < 2:2729014/136‑1 TATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGGGTAGGTTTCCGTAATATTCCGTAGAAAGGAGGTGATCCAGCCGCA > 2:1028342/1‑136 TATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGA < 1:1318130/84‑1 TATGAAAAAATATAATTGATATTATCTAGTTTTCAAAGAACAAGATTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCA > 2:1561067/1‑136 AAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTC < 2:166697/136‑1 AAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTC < 2:288646/136‑1 AAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCT > 1:2236232/1‑135 TATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTA < 2:1996428/136‑1 TTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGC < 1:82574/136‑1 TTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCT < 1:2589815/136‑1 TTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTG < 2:2084072/136‑1 TTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTG < 1:953677/136‑1 TTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTG > 2:2615861/1‑136 TTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTG < 1:2336170/136‑1 AGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGA < 1:2278280/136‑1 AGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGA < 1:1388788/136‑1 gTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACT < 2:1087919/134‑1 TTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATAGTCCTTAGAAAGGAGGTGATCCAGCCGCGGGTTCTCCTACGGCTACCTTGTTACGACTTC < 2:409232/136‑1 TCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTG > 2:1251695/1‑125 TCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGGGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTCCCTTGTTACGACTTC > 2:1326811/1‑135 AAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACC < 2:2147425/136‑1 AAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACC < 1:371688/136‑1 ACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAAT < 1:1172802/136‑1 ACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAAT < 1:58818/136‑1 ACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAAT < 2:632629/136‑1 ACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAAT < 2:575954/136‑1 CAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATC < 1:1026438/136‑1 TTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCTTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTAAGACTTCACCCTAATCATCT < 2:531600/136‑1 TTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTG < 2:891391/136‑1 TTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCT < 1:1735335/135‑1 TTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCT < 1:2136883/135‑1 aagCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAG > 1:1819975/4‑136 AATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGC > 1:1450477/1‑94 ATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAG > 1:1679381/1‑135 CTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCAGC < 2:2665823/136‑1 CTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCAGC < 1:2628726/136‑1 CTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCAGC < 1:319971/136‑1 AAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGG > 1:458461/1‑136 AAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGGT > 2:1409355/1‑136 ACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCAGCTGGTTC < 2:1862108/136‑1 CTAAACAACGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGGTTCC < 2:2782100/136‑1 AAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGGTTCCTA < 2:751868/136‑1 AAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGGTTCCTAAAAG < 1:1924658/136‑1 AAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGGTTCC < 1:687384/130‑1 AAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCAGCTGGTTCCTAAAAGG > 1:2374033/1‑136 AGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCAGCTGGTTCCTAAAAGGT < 1:123029/136‑1 TCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCAGCTGGTTCCTAAACGGTTACC < 2:1434425/136‑1 TCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCAGCTGGTTCCTAAAAGGTTACC < 1:2705897/136‑1 TCGACGCGTGTGTAGGTTTCCGTAATATTCCTGAGAAAGGAGGTGATCCAGCAGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCAGCTGGTTCCTAAAAGGTTACC < 2:1917663/136‑1 CGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCAGCTGGTTCCTAAAAGGTTACCC < 2:15177/136‑1 ||||||||||||||||||||||||||||||||||||||||| TTACCTAACGGTAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_28/3051‑3183‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGGTTCCTAAAAGGTTACCCCACCG < TrimmedAssembly_T66_contig_32/1640‑1507 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |