mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 70,867 | T→C | D92G (GAC→GGC) | araA ← | L‑arabinose isomerase |
| RA | 2,847,052 | A→G | V10A (GTT→GCT) | recD ← | exodeoxyribonuclease V subunit alpha |
| RA | 3,733,506 | A→C | intergenic (‑189/‑25) | kbl ← / → rfaD | glycine C‑acetyltransferase/ADP‑glyceromanno‑heptose 6‑epimerase |
| RA | 3,927,576 | Δ1 bp | coding (16/330 nt) | trxA → | thioredoxin TrxA |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 2322337 = | 5 (0.100) | 36 (0.740) | 29/156 | 0.5 | 88.2% | coding (139/963 nt) | menC | o‑succinylbenzoate synthase |
| ? | NC_012967 | 2772857 = | NA (NA) | intergenic (+378/‑54) | iap/ECB_RS13760 | alkaline phosphatase isozyme conversion aminopeptidase/IS4‑like element IS421 family transposase | |||||
| * | ? | NC_012967 | = 2322348 | 4 (0.080) | 50 (1.030) | 34/156 | 0.4 | 92.8% | coding (128/963 nt) | menC | o‑succinylbenzoate synthase |
| ? | NC_012967 | = 2774193 | NA (NA) | intergenic (+170/+23) | ECB_RS13760/ECB_RS13765 | IS4‑like element IS421 family transposase/Hok/Gef family protein | |||||