New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2571158 =	38 (0.760)	4 (0.080)	4/322	NT	10.2%	coding (1279/1311 nt)	dctA‑III	C4‑dicarboxylate transport protein
	?	AE015451	2571261 =	34 (0.710)					coding (1176/1311 nt)	dctA‑III	C4‑dicarboxylate transport protein

CGCCACCCTGACTGCGGTACCGGCGATCCCTGTGGTTGGCCTGGTACTGGTGCTGGCGGTGGACTGGTTCATGGGTATCGGCCGGGCGTTGACCAACCTGATCGGCAACTGCGTGGCCACCGTGGCCATTGCCCGTTGGGAGAAGGACATTGACCTGGAACGTGCGCAGAACGTGCTCGACGGCAAGCCTGGCTTTGCCCCCACGCCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2571369‑2571158 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgcaGTTGCCGATCAGGTTGGTCAACGCCCGGCCGATACCCATGAACCAGT  >  AE015451/2571261‑2571307                                                                                                                                                                                                                                                                     CGCCACCCTGACTGCGGTACCGGCGATCCCTGTGGTTGGCCTGGTACTGGTGCTGGCGGTGGACTGGTTCATGGGTATCGGCCGGGCGTTGACCAACCTGATCGGCAACTGCGTGGCCACCGTGGCCATTGCCCGTTGGGAGAAGGACATTGACCTGGAACGTGCGCAGAACGTGCTCGACGGCAAGCCTGGCTTTGCCCCCACGCC                                                      >  1:83764/1‑207                                                    GCTGGCGGTGGACTGGTTCATGGGTATCGGCCGGGCGTTGACCAACCTGATCGGCAACTGCGTGGCCACCGTGGCCATTGCCCGTTGGGAGAAGGACATTGACCTGGAACGTGCGCAGAACGTGCTCGACGGCAAGCCTGGCTTTGCCCCCACGCCACGC                                                  >  2:377680/1‑160                                                                                                                                               AAGGACATTGACCTGGAACGTGCGCAGAACGTGCTCGACGGCAAGCCTGGCTTTGCCCCCACGCCACGCAGTTGCCGATCAGGTTGGTCAACGCCCGGC                    >  1:365229/1‑99                                                                                                                                               AAGGACATTGACCTGGAACGTGCGCAGAACGTGCTCGACGGCAAGCCTGGCTTTGCCCCCACGCCACGCAGTTGCCGATCAGGTTGGTCAACGCCCGGC                    <  2:365226/99‑1                                                                                                                                                                               GCTCGACGGCAAGCCTGGCTTTGCCCCCACGCCACGCAGTTGCCGATCAGGTTGGTCAACGCCCGGCCGATACCCATGAACCAGT  <  1:924279/85‑1                                                                                                                                                                               GCTCGACGGCAAGCCTGGCTTTGCCCCCACGCCACGCAGTTGCCGATCAGGTTGGTCAACGCCCGGCCGATACCCATGAACCAGT  >  2:924276/1‑85                                                                                                                                                                                                                                                                     CGCCACCCTGACTGCGGTACCGGCGATCCCTGTGGTTGGCCTGGTACTGGTGCTGGCGGTGGACTGGTTCATGGGTATCGGCCGGGCGTTGACCAACCTGATCGGCAACTGCGTGGCCACCGTGGCCATTGCCCGTTGGGAGAAGGACATTGACCTGGAACGTGCGCAGAACGTGCTCGACGGCAAGCCTGGCTTTGCCCCCACGCCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2571369‑2571158 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgcaGTTGCCGATCAGGTTGGTCAACGCCCGGCCGATACCCATGAACCAGT  >  AE015451/2571261‑2571307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.