New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5432919 =	31 (0.620)	3 (0.060)	3/318	NT	10.7%	coding (2345/2529 nt)	hrpB	ATP‑dependent helicase HrpB
	?	AE015451	5433100 =	21 (0.450)					coding (2164/2529 nt)	hrpB	ATP‑dependent helicase HrpB

CTGAGCAAAGTATCGCGCCTCAGCCACTTTGCCGCGCTGGACTTGCCGTCGATGCTGCGCAACCTGCTGCCCTGGCCGCTGCCGCAACGCCTGGAAGAACAGGCCCCGGCGCATTTGGCCGTGCCGTCCGGCTCGAACATCCGCCTGGATTACAGCGAAACCCCGCCGATTCTTGCCGTGCGTCTGCAAGAACTGTTCGGCCTTGCCGACACCCCGCGCATCGCCAATGGCCGGCAGCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5433160‑5432919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcaggtTGCGCAGCATCGACGGCAAGTCCAGCGCGGCAAAGTGGCTGAGGCGCGATACTTTGCTCAGGTAAGGCTGTAACCAGTCTTCCAGGCTGGCCAGCAGGGCTTCGTCCCCCAGGTCAGGCCATTCGCTGTGGCCATCCTTCTGCAGGTCGAGCTGACGCAGCAGCGCCACACGTGCCTGCCAT  >  AE015451/5433100‑5433281                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGAGCAAAGTATCGCGCCTCAGCCACTTTGCCGCGCTGGACTTGCCGTCGATGCTGCGCAACCTGCTGCCCTGGCCGCTGCCGCAACGCCTGGAAGAACAGGCCCCGGCGCATTTGGCCGTGCCGTCCGGCTCGAACATCCGCCTGGATTACAGCGAAACCCCGCCGATTCTTGCCGTGCGTCTGCAAGAACTGTTCGGCCTTGCCGACACCCCGCGCATCGCCAATGGCCG                                                                                                                                                                                                 >  2:406420/1‑233                                                        TGCGCAACCTGCTGCCCTGGCCGCTGCCGCAACGCCTGGAAGAACAGGCCCCGGCGCATTTGGCCGTGCCGTCCGGCTCGAACATCCGCCTGGATTACAGCGAAACCCCGCCGATTCTTGCCGTGCGTCTGCAAGAACTGCTCGGCCTTGCCGACACCCCGCGCATCGCCAATGGCCGGCAGCAGGT                                                                                                                                                                                        >  2:589063/1‑187                                                                                                                                        AACATCCGCCTGGATTACAGCGAAACCCCGCCGATTCTTGCCGTGCGTCTGCAAGAACTGTTCGGCCTTGCCGACACCCCGCGCATCGCCAATGGCCGGCAGCAGGTTGCGCAGCATCGACGGCAAGTCCAGCGCGGCAAAGTGGCTGAGGC                                                                                                                                           >  1:397748/1‑152                                                                                                                                        AACATCCGCCTGGATTACAGCGAAACCCCGCCGATTCTTGCCGTGCGTCTGCAAGAACTGTTCGGCCTTGCCGACACCCCGCGCATCGCCAATGGCCGGCAGCAGGTTGCGCAGCATCGACGGCAAGTCCAGCGCGGCAAAGTGGCTGAGGC                                                                                                                                           <  2:397745/152‑1                                                                                                                                                            CGAACCCCCGCCGATTCTTGCCGTGCGTCTGCAAGAACTGTTCGGCCTTGCCGACACCCCGCGCATCGCCAATGGCCGGCAGCAGG                                                                                                                                                                                         <  2:253744/86‑1                                                                                                                                                                                  GTGCGTCTGCAAGAACTGTTCGGCCTTGCCGACACCCCGCGCATCGCCAATGGCCGGCAGCAGGTTGCGCAGCATCGACGGCAAGTCCAGCGCGGCAAAGTGGCTGAGGCGCGATACTTTGCTCAGGTAAGGCTGTAACCAGTCTTCCAGGCTGGCCAGCAGGGCTTCGTCCCCCAGGTCAGGCCATTCGCTGTGGCCATCCTTCTGCAGGTCGAGCTGACGCAGCAGCGCC                 >  1:11862/1‑232                                                                                                                                                                                                                                           CAGCAGGTTGCGCAGCATCGACGGCAAGTCCAGCGCGGCAAAGTGGCTGAGGCGCGATACTTTGCTCAGGTAAGGCTGTAACCAGTCTTCCAGGCTGGCCAGCAGGGCTTCGTCCCCCAGGTCAGGCCATTCGCTGTGGCCATCCTTCTGCAGGTCGAGCTGACGCAGCAGCGCCACACGCGCCTGCCAg  >  2:192731/1‑189                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGAGCAAAGTATCGCGCCTCAGCCACTTTGCCGCGCTGGACTTGCCGTCGATGCTGCGCAACCTGCTGCCCTGGCCGCTGCCGCAACGCCTGGAAGAACAGGCCCCGGCGCATTTGGCCGTGCCGTCCGGCTCGAACATCCGCCTGGATTACAGCGAAACCCCGCCGATTCTTGCCGTGCGTCTGCAAGAACTGTTCGGCCTTGCCGACACCCCGCGCATCGCCAATGGCCGGCAGCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5433160‑5432919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcaggtTGCGCAGCATCGACGGCAAGTCCAGCGCGGCAAAGTGGCTGAGGCGCGATACTTTGCTCAGGTAAGGCTGTAACCAGTCTTCCAGGCTGGCCAGCAGGGCTTCGTCCCCCAGGTCAGGCCATTCGCTGTGGCCATCCTTCTGCAGGTCGAGCTGACGCAGCAGCGCCACACGTGCCTGCCAT  >  AE015451/5433100‑5433281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.