New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3272245	41 (0.820)	5 (0.110)	5/320	NT	11.3%	intergenic (‑161/‑14)	PP_2869/PP_2870	Oxidoreductase, FMN‑binding/putative spermidine/putrescine‑binding periplasmic protein
	?	AE015451	= 3272356	40 (0.840)					coding (98/1044 nt)	PP_2870	putative spermidine/putrescine‑binding periplasmic protein

GTTTGCCGCGGATCTGCAAGGGCTCGAACAGGAGTGGGAAGGCGGTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTCAAGCCCTTCGTTGCCCAGGACGGCAGCCAGCTGATCCAGAGTGAATACAACGGCGAAATGGCACGGATCCAGGTCATGGC  >  AE015451/3272033‑3272476                                                                                                                                                                                                                     |                                                                                                                                                                                                                                        gtgtGCCGCGGATCTGCAAGGGCTCGAACAGGAGTGGGAAGGCGGTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATg                                                                                                                                                                                                                         <  1:55918/226‑1 (MQ=255)  tttGCCGCGGATCTGCAAGGGCTCGAACAGGAGTGGGAAGGCGGTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCtat                                                                                                                                                                                                                  <  1:681613/235‑1 (MQ=255)       cgcgGATCTGCAAGGGCTCGAACAGGAGTGGGAAGGCGGTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCAc                                                                                                                                                                                                            >  1:253945/1‑236 (MQ=255)            aTCTGCAAGGGCTCGAACAGGAGTGGGAAGGCGGTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGtgtg                                                                                                                                                                                                       <  1:406672/236‑1 (MQ=255)                           aaCAGGAGTGGGAAGGCGGTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTAc                                                                                                                                                                                                                             <  2:432935/199‑1 (MQ=255)                            aCAGGAGTGGGAAGGCGGTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCATCTATATCCACGTGTGACCGGCCTTTGTGCAg                                                                                                                                                                                       >  1:241740/1‑236 (MQ=255)                                gggTGGGAAGGCGGTCTGCAGCAGGCGGCTCCGTGGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCtat                                                                                                                                                                                                                  <  2:253942/203‑1 (MQ=255)                                            ggTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTAc                                                                                                                                                                                                                             <  2:925274/182‑1 (MQ=255)                                             gTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGc                                                                                                                                                                      >  1:599823/1‑236 (MQ=255)                                             gTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACATCAGAACAACAAGAAAACGGGACCGTCGGGCACCGCAAGGAGGAAACTAAGATGCAGCt                                                                                                                                                                                                                    >  1:61399/1‑190 (MQ=255)                                             gTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTG‑TTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCTTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCttgtt                                                                                                                                                                                >  1:264838/1‑225 (MQ=255)                                                tGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTg                                                                                                                                                                   >  1:629118/1‑236 (MQ=255)                                                                ggtgcggtgTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCa                                                                                                                                                                                                                       >  1:436685/1‑168 (MQ=255)                                                                ggtgcggtgTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCA                                                                                                                                                                                                                                         <  2:436146‑M1/150‑1 (MQ=255)                                                                    ggttgttgtTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCgg                                                                                                                                                                                                  <  2:235989/182‑1 (MQ=255)                                                                              aTTTTTACTTATAAAAGTGTAGCGATAGTGAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGAtggtc                                                                                                                                     <  1:888300/236‑1 (MQ=255)                                                                                    aCTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCaggc                                                                                                                                                                                                                                      >  2:287550/1‑132 (MQ=255)                                                                                    aCTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCagga                                                                                                                                                                                                                                      <  1:287553/133‑1 (MQ=255)                                                                                    aCTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGAtggtcgtg                                                                                                                                  <  1:435661/233‑1 (MQ=255)                                                                                    aCTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGAtggtcgtg                                                                                                                                  >  2:435658/1‑233 (MQ=255)                                                                                      ttATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCGGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGAtggtcgtggtcg                                                                                                                              >  1:528319/1‑235 (MQ=255)                                                                                      ttATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTgg                                                                                                                                                                              <  1:366906/187‑1 (MQ=255)                                                                                      ttATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTgg                                                                                                                                                                              >  2:366903/1‑187 (MQ=255)                                                                                              gtgtAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTAtggcg                                                                                                                     >  1:483116‑M2/1‑231 (MQ=255)                                                                                                   gCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTAt                                                                                                                         >  1:24290‑M2/1‑226 (MQ=255)                                                                                                    cGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCa                                                                                                                                                                                                                       >  2:832363/1‑132 (MQ=255)                                                                                                    cGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCa                                                                                                                                                                                                                       <  1:832366/132‑1 (MQ=255)                                                                                                                aTCAACTTGTTTTTTTCTTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAg                                                                                                                                                      <  1:34610/185‑1 (MQ=255)                                                                                                                    aCTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTAtggcggcg                                                                                                                  <  1:206644‑M2/217‑9 (MQ=255)                                                                                                                              ttacttacGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAACAAAACGGGCCCGTCGGGCCCCGCCAGGAGGAAACTACGATGCCGCTATATCCACGTGTGACCGGCCTTTGTGCAGcc                                                                                                                                                                                     <  2:454265/140‑1 (MQ=255)                                                                                                                                      gtctgtctAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCggg                                                                                                              >  2:432462/1‑203 (MQ=255)                                                                                                                                             tAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGGGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAg                                                                                           >  1:901785/1‑215 (MQ=255)                                                                                                                                                 ttttCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACg                                                                                                                                                                                                                            <  2:655145/82‑1 (MQ=255)                                                                                                                                                 ttttCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACg                                                                                                                                                                                                                            >  1:655148/1‑82 (MQ=255)                                                                                                                                                        cACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAtaaccgaccacgaccatctgctgcgcagcttgc                                                                                                                                                                                                        >  1:915279‑M1/1‑62 (MQ=255)                                                                                                                                                        cACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAtaaccgaccacgaccatctgctgcgcagcttgc                                                                                                                                                                                                        <  2:915276‑M1/95‑34 (MQ=255)                                                                                                                                                        cACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTAtggcg                                                                                                                     <  1:167879‑M2/178‑6 (MQ=255)                                                                                                                                                            cGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATg                                                                                             >  2:442013/1‑198 (MQ=255)                                                                                                                                                            cGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATg                                                                                             <  1:442016/198‑1 (MQ=255)                                                                                                                                                                        gtgtGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTCACGCCCTTCGTTGCCCAg                                                                >  1:630356/1‑215 (MQ=255)                                                                                                                                                                        gtgtGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGCGGTCGGTTATGGCGGGGCGGGccg                                                                                                           >  1:207358/1‑171 (MQ=255)                                                                                                                                                                          gtgACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAtaaccgaccacgaccatctgctgcgcagcttgcgcattgctcaggccaagggccaacaaggctgcacaaaggccggtcacacgtcgatatagctgcatcgtagtttcctcctg                                                                                                                        >  1:544025‑M1/1‑44 (MQ=255)                                                                                                                                                                              ccTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAtaaccgaccacgaccatctgctgcgcagcttgcgcattgctcaggccaagggccaacaaggctgcacaaaggccggtcacacgtggatatagctgcatcgtagtttcctcctggcggtgcccgacgggc                                                                                                        >  1:462381‑M1/1‑40 (MQ=255)                                                                                                                                                                                tCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTCAAGCCCTTCGTTGCCCAGGACGGCAGCCAGCTGATCCaga                                          >  1:327003/1‑229 (MQ=255)                                                                                                                                                                                    aacaacAAGAAAACGGGCCCGTCGGGCACCGCCAtaaccgaccacgaccatctgctgcgcagcttgcgcattgctcaggccaagggccaacaaggctgcacaaaggccggtcacacgtggatatagctgcatcgtagtttcctcctggcggtgcccgacgggcccgttttcttgttgt                                                                                         >  2:364932‑M1/1‑34 (MQ=255)                                                                                                                                                                                     acaacaAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTAtggcggtgcccgacgggcccgttttcttgttgtt                                                                                        >  2:364932‑M2/1‑144 (MQ=255)                                                                                                                                                                                      caacaaGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGCTGGTCGTGGTCGGTTAtggcggg                                                                                                                   <  1:231817‑M2/150‑8 (MQ=255)                                                                                                                                                                                          aaGCAAACGGGCCCGTCGGGCACCGCCAGGAGGAACCTCCGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATgcgc                                                                                                                                                         <  2:123649/108‑1 (MQ=255)                                                                                                                                                                                            gAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTAtggcgg                                                                                                                    <  2:176136‑M2/143‑7 (MQ=255)                                                                                                                                                                                            gAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTCAAGCCCTTCGTTGCCCAGGACGGCAGCCAGCTGATCCAGAGTGAATACAACGGCGAAAt                       >  1:928411/1‑236 (MQ=255)                                                                                                                                                                                               aaCGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTCAAGCCCTTCGTTGCCCAGGACGGCAGCCAGCTGATCCAGAGTGAATACAACGGCGAAATg                      <  1:889832/234‑1 (MQ=255)                                                                                                                                                                                                    gCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTAtggcggtgcccgacgggcccgttttcttgttgttctgagg                                                                                  >  1:462381‑M2/1‑129 (MQ=255)                                                                                                                                                                                                      ccGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCatgagtc                                                                                                     >  1:263527/1‑142 (MQ=255)                                                                                                                                                                                                       cGTCGGGCACCGCCAGGAGGAAACTACGATGCTGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTAtggcg                                                                                                                     >  2:512106‑M2/1‑126 (MQ=255)                                                                                                                                                                                                       cGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTAtggcg                                                                                                                     <  1:512109‑M2/131‑6 (MQ=255)                                                                                                                                                                                                       cGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTc                                                                                  >  2:759730/1‑166 (MQ=255)                                                                                                                                                                                                          cGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTCAAGCCCTTCGTTGCCCAGGACGGCAGCCAGCt                                                  >  1:900115/1‑195 (MQ=255)                                                                                                                                                                                                              cgccgcCAtaaccgaccacgaccatctgctgcgcagcttgcgcattgctcaggccaagggccaacaaggctgcacaaaggccggtcacacgtggatatagctgcatcgtagtttcctcctggcggtgcccgacgggcccgttttcttgttgttctgaggtcacaccctcgccatgcgagtgaggaaaacctagacagacgtaagtaaaaaaacaagt                        <  1:206644‑M1/215‑210 (MQ=255)                                                                                                                                                                                                               gccGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTCAAGCCCTTCGTTGCCCAGGACGGCAGCCAGCTGATCCAGAGTGAATACAACGGCGAAATGGCACGGATCCAGGTCAt     <  1:934132/234‑1 (MQ=255)                                                                                                                                                                                                               cccgCCAtaaccgaccacgaccagctgctgcgcagcttgcgcattgctcaggccaagggccaacaaggctgcacaaaggccggtcacacgtggatatagctgcatcgtagtttcctcctggcggtgcccgacgggcccgttttcttgttg                                                                                          <  1:231817‑M1/149‑144 (MQ=255)                                                                                                                                                                                                               aCCGCCAtaaccgaccacgaccatctgctgcgcagcttgcgcattgctcagg                                                                                                                                                                                            <  1:315437‑M1/52‑46 (MQ=255)                                                                                                                                                                                                               aCCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTCAAGCCCTTCGTTGCCCAGGACGGCAGCCAGCTGATCCAGAGTGAATACAACGGCGAAATGGCACGGATCCAGGTCATg    <  1:432465/236‑1 (MQ=255)                                                                                                                                                                                                                ccGCCAtaaccgaccacgaccatctgctgcgcagcttgcgcattgctcaggccaagggccaacaaggctgcacaaaggccggtcacacgtggatatagctgcatcgtagtttcctcctggcggtgcccgacgggcccgttttc                                                                                                <  2:176136‑M1/143‑138 (MQ=255)                                                                                                                                                                                                                 cGCCAtaaccgaccacgaccatctgctgcgcagcttgcgcattgctcaggccaagggccaacaaggctgcacaaaggccggtcacacgtggatatagctgcatcgtagtttcctcctggcggtgcccgacgggcccgttttcttgttgttctgaggtcacaccctcgccatgcgagtgaggaaaacctagacagacgtaagtaaaaaaacaagttgattttttactatcgctacac  >  1:483116‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                 cGCCAtaaccgaccacgaccatctgctgcgcagcttgcgcattgctcaggccaagggccaacaaggctgcacaaaggccggtcacacgtggatatagctgcatcgtagtttcctcctggcggtgcccgacgggcccgttttcttgttgttctgaggtcacaccctcgccatgcgagtg                                                            <  1:167879‑M1/178‑174 (MQ=255)                                                                                                                                                                                                                 cGCCAtaaccgaccacgaccatctgctgcgcagcttgcgcattgctcaggccaagggccaacaaggctgcacaaaggccggtcacacgtggatatagctgcatcgtagtttcctcctggcggtgcccgacg                                                                                                           <  1:512109‑M1/131‑127 (MQ=255)                                                                                                                                                                                                                 cGCCAtaaccgaccacgaccatctgctgcgcagcttgcgcattgctcaggccaagggccaacaaggctgcacaaaggccggtcacacgtggatatagcagcatcgtagtttcctcctggcggtgcccgacg                                                                                                           >  2:512106‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                  gCCAtaaccgaccacgaccatctgctgcgcagcttgcgcattgctcag                                                                                                                                                                                             <  2:330415‑M1/48‑45 (MQ=255)                                                                                                                                                                                                                   ccAGGAGGAAACTACGATGCAGCTATATCCCCGCGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTCAAGCCCTTCGTTGCCCAGGACGGCAGCCAGCTGATCCAGAGTGAATACAACGGCGAAATg                      <  1:784172/214‑1 (MQ=255)                                                                                                                                                                                                                    cAGGAGGAAACTACGATGCAGCTATATCGACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTAtggcggtgcccgacgggcccgttttcttgttgttctgaggtcac                                                                              >  1:544025‑M2/1‑113 (MQ=255)                                                                                                                                                                                                                     ataaccgaccacgaccatctgctgcgcagcttgcgcattgctcaggccaagggccaacaaggctgcacaaaggccggtcacacgtggatatagctgcatcgtagtttcctcctggcggtgcccgacgggcccgttttcttgttgttctgaggtcacaccctcgccatgcgagtgaggaaaacctagacagacgtaagtaaaaaaacaagttgattttttactatcgc       >  1:24290‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                     aggaggAAACTACGATGCAGCTCTATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTCAAGCCCTTCGTTGCCCAGGACgg                                                           <  2:291660/175‑1 (MQ=255)                                                                                                                                                                                                                     |                                                                                                                                                                                                                                        GTTTGCCGCGGATCTGCAAGGGCTCGAACAGGAGTGGGAAGGCGGTCTGCATCAGGCGGCTCCGGTGCGGTGTTGTTATTTTTACTTATAAAAGTGTAGCGATAGTAAAAAATCAACTTGTTTTTTTACTTACGTCTGTCTAGGTTTTCCTCACTCGCATGGCGAGGGTGTGACCTCAGAACAACAAGAAAACGGGCCCGTCGGGCACCGCCAGGAGGAAACTACGATGCAGCTATATCCACGTGTGACCGGCCTTTGTGCAGCCTTGTTGGCCCTTGGCCTGAGCAATGCGCAAGCTGCGCAGCAGATGGTCGTGGTCGGTTATGGCGGTGCGGGCCAGAAGGCCCAGGATGAGGCGATCTTCAAGCCCTTCGTTGCCCAGGACGGCAGCCAGCTGATCCAGAGTGAATACAACGGCGAAATGGCACGGATCCAGGTCATGGC  >  AE015451/3272033‑3272476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.