New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 2494736 | 29 (0.580) | 3 (0.060) | 3/320 | NT | 8.2% | intergenic (‑99/‑56) | PP_2187/PP_2188 | Universal stress protein family/putative tRNA‑(Ms(2)io(6)a)‑hydroxylase |
? | AE015451 | = 2494831 | 40 (0.840) | coding (40/618 nt) | PP_2188 | putative tRNA‑(Ms(2)io(6)a)‑hydroxylase |
CATGGGCGTAAACTCCCTTCGATGATGGCGACCAGTGCCTGACTATAGTCGGCGCTTTCACCTCCAGCGCTTGATGTACATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCTGGTGCACCACGAACAGGTGTTACGCCTCATGAAACGCCGCGGTGTG > AE015451/2494635‑2495046 | cATGGGCGTAAACTCCCTTCGATGATGGCGACCAGTGCCTGACTATAGTCGGCGCTTTCACCTCCAGCGCTTGATGTACATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGAcc < 1:414319/236‑1 (MQ=255) gatgGCGACCAGTGCCTGACTATAGTCGGCGCTTTCACCTCCAGCGCTTGATGTACATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATc < 2:647910/230‑1 (MQ=255) aGTGCCTGACTATAGTCGGCGCTTTCACCTCCAGCGCTTGATGTACATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGcct > 2:591795/1‑199 (MQ=255) tttCACCTCCAGCGCTTGATGTACATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTg > 2:903790/1‑212 (MQ=255) cACCTCCAGCGCTTGATGTACATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGgccgtgctggcggc > 2:673091/1‑223 (MQ=255) gcTTGATGTACATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATc < 1:236437/236‑1 (MQ=255) gcTTGATGTACATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATc < 1:364029/236‑1 (MQ=255) gTACATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCTGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCa < 1:515652/209‑1 (MQ=255) gTACATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCa > 2:515649/1‑209 (MQ=255) aCATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATAGACGCCTTTCTTGGCTGCCCGACGCCAGAt < 2:729312/131‑1 (MQ=255) aCATCAAGCATACTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGcc < 1:87112/222‑1 (MQ=255) cATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTc < 1:456174/235‑1 (MQ=255) aTAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAg > 2:859218/1‑135 (MQ=255) aTAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCAc > 1:492535/1‑236 (MQ=255) tAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTc > 2:867035/1‑233 (MQ=255) tCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCa < 2:823273/194‑1 (MQ=255) tGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCt < 1:788843/236‑1 (MQ=255) cGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTg > 2:404490/1‑234 (MQ=255) gTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCcgacgccagtgactatgcttgatgtacatcaagcgctggaggtgaaagcgccgactatagtcaggcactggtcgccatcatcgaagggagtttacgcccatgcaagccgtccgcagcatcctcgtcgtcctcgacc < 2:563211‑M2/235‑137 (MQ=255) gTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCg > 2:197966/1‑132 (MQ=255) gCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCg < 1:113375/129‑1 (MQ=255) ccgccgccgGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACatga < 1:758947/235‑1 (MQ=255) cgccgGTATAATCGCCGAACCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATc < 1:15528/194‑1 (MQ=255) aCCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCcgacgccagtgactatgcttgatgtacatcaagcgctggaggtgaa < 2:875964‑M2/116‑47 (MQ=255) ctgcctgTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCt < 1:655772/236‑1 (MQ=255) gcctgTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTaca < 1:660345/182‑1 (MQ=255) tCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCTGGTGcacc < 1:828363/236‑1 (MQ=255) tgtgGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTacaa < 2:560017/173‑1 (MQ=255) tgGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCa < 2:609392/140‑1 (MQ=255) ggTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCaa > 1:356272/1‑191 (MQ=255) gTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCcgacgccagtgactatgcttgatgtacatcaagcgctggaggtgaaagcgccgactatagtcaggcactggtcgccatcatcgaagggagtttacgcccatgcaagccgtccgcagcatcctcg < 1:776750‑M2/175‑125 (MQ=255) ttGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCTGGTGCACCACGAACAgg < 1:206344/236‑1 (MQ=255) tGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCATTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTacaa < 1:249195/167‑1 (MQ=255) cACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCAACTGGATCTGATCAACATGATGTcg > 2:343424/1‑196 (MQ=255) tCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCAc > 2:292877/1‑128 (MQ=255) cTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCTGGTGcacc > 2:603446/1‑211 (MQ=255) tCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCTGGTGCACCACGAACAGGTGTTACGCCTCATGAAAcg < 1:903793/235‑1 (MQ=255) ccccGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCTGGTGCACCACGa > 1:68684/1‑210 (MQ=255) ccGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCTGGTGCACCACGAACAGGTGTTACGCCTCATGAAAcg < 2:796379/232‑1 (MQ=255) aTCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCaa < 2:70325/134‑1 (MQ=255) tCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCTGGTGCACCACGAACAGGTGTTACGCCTCATGAAACGCCGCGGtgtg < 1:603449/236‑1 (MQ=255) cGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGa < 1:859221/71‑1 (MQ=255) ttCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCATGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCTGGTGCACCACGAACAGGTGTTACGCCTCATGAAAcgcc < 1:203405/219‑1 (MQ=255) cTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCTGGTGCACCACg < 2:767337/190‑1 (MQ=255) | CATGGGCGTAAACTCCCTTCGATGATGGCGACCAGTGCCTGACTATAGTCGGCGCTTTCACCTCCAGCGCTTGATGTACATCAAGCATAGTCACTGGCGTCGCCAGCCGCCGCCGGTATAATCGCCGACCCTGCCTGTTCTGTGTGGTTGCACGCTTATGTCCCTGATCCCCGAAATCGACGCCTTTCTTGGCTGCCCGACGCCAGATGCCTGGATCGAAGCGGCGCTCGCCGACCAGGAAACCCTGCTGATCGACCACAAGAACTGCGAGTTCAAGGCCGCCAGCACGGCCTTGAGCCTGATCGCCAAGTACAACACTCACCTGGATCTGATCAACATGATGTCGCGCCTGGCCCGCGAGGAGCTGGTGCACCACGAACAGGTGTTACGCCTCATGAAACGCCGCGGTGTG > AE015451/2494635‑2495046 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |