New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5638869	44 (0.880)	5 (0.110)	5/316	NT	10.4%	coding (1403/1443 nt)	PP_4949	putative peptidase, TldD/PmbA family
	?	AE015451	= 5639034	45 (0.960)					coding (126/1320 nt)	PP_4950	conserved protein of unknown function

GGGCACGCCCAACTGTGGCAAGGGCGAACCCAATCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCTGGCACAGCCATAGCCTGCAGGAACCCCCCCTGCCCGC  >  AE015451/5638801‑5639264                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                       gggCACGCCCAACTGTGGCAAGGGCGAACCCAATCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTgcgc                                                                                                                                                                                                                                        >  1:570919/1‑234 (MQ=255) gggCACGCCCAACTGTGGCAAGGGCGAACCCAATCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCca                                                                                                                                                                                                                                      <  1:730971‑M2/236‑3 (MQ=255)             cTGTGGCAAGGGCGAACCCAATCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGt                                                                                                                                                                                                                          <  1:401141/236‑1 (MQ=255)                        gCGAACCCAATCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGGTCGTGCGTTTCAACCATGCCAAGGTGCGCCCGGCCGGCGAAGTCAgccaggcca                                                                                                                                                                                                               >  1:202373/1‑236 (MQ=255)                                 aTCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAgccagg                                                                                                                                                                                                                  <  1:378341/224‑1 (MQ=255)                                     ggtggtGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGaa                                                                                                                                                                                                                            >  2:719342/1‑210 (MQ=255)                                         gtgCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAgccaggccag                                                                                                                                                                                                              >  1:630743/1‑220 (MQ=255)                                                       cGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCt                                                                                                                                                                                               >  2:450926/1‑221 (MQ=255)                                                                         gtTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGt                                                                                                                                                              >  1:826657/1‑236 (MQ=255)                                                                                   aTCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAgc                                                                                                                                                    >  1:725668/1‑236 (MQ=255)                                                                                   aTCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAgc                                                                                                                                                    >  1:562876/1‑236 (MQ=255)                                                                                            ttCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAgcgc                                                                                                                                                                                                           <  1:38232/172‑1 (MQ=255)                                                                                            ttCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGc                                                                                                                                                                                                   <  2:15925/180‑1 (MQ=255)                                                                                                      aCGCCTGATGAAGCACGCGTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGGAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATc                                                                                                                                 <  1:199945/236‑1 (MQ=255)                                                                                                       cGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAgcgcgc                                                                                                                                                                                                         >  1:303234/1‑163 (MQ=255)                                                                                                        gCCCGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATc                                                                                                                                 <  1:635168/234‑1 (MQ=255)                                                                                                         ccTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCcaggccggcgaggcgtggccg                                                                                                                                                                                                                   >  1:173950‑M2/1‑130 (MQ=255)                                                                                                         ccTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTgg                                                                                                                                    >  2:473357/1‑230 (MQ=255)                                                                                                                     cGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGCCCGGCGAAGTCAgc                                                                                                                                                                                                                      >  1:455576/1‑136 (MQ=255)                                                                                                                     cGCTGTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGcc                                                                                                                                                                              <  2:498039/176‑1 (MQ=255)                                                                                                                                  cTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGagc                                                                                                      >  1:342172/1‑235 (MQ=255)                                                                                                                                            aGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGcc                                                                                             <  2:562873/234‑1 (MQ=255)                                                                                                                                             ggTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCCGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAAcagcag                                                                                                                                                                >  2:461448/1‑166 (MQ=255)                                                                                                                                                      cgccCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCgc                                                                                 <  1:473360/236‑1 (MQ=255)                                                                                                                                                       gccCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcgc                                                                                                            >  2:485961/1‑208 (MQ=255)                                                                                                                                                         gcTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAgcca                                                                                                                                                                                                                    <  2:166387/101‑1 (MQ=255)                                                                                                                                                           ttCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCCGCGCCTGCACGTTGCGCt                                                                                                           >  2:15976/1‑205 (MQ=255)                                                                                                                                                            tCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGAt                                                                                                                                                                                     >  1:587986/1‑130 (MQ=255)                                                                                                                                                            tCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGAt                                                                                                                                                                                     <  2:587983/130‑1 (MQ=255)                                                                                                                                                                      gAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGAcc                                                                  >  1:383619/1‑235 (MQ=255)                                                                                                                                                                       aGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGAccc                                                                 >  2:781531/1‑235 (MQ=255)                                                                                                                                                                        gCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCcaggccggcgaggcgtggccgacccgcaccacctgattgggttcgcccttgccacagttgggcgtgcccagcacctggaaggtactgtggtcgccaaccgccgacaggttgcgccagaactgcgcggagatgccgcggtagttggggttcttgacgatgcccttgagc                                                                <  1:481967‑M2/235‑169 (MQ=255)                                                                                                                                                                                     ggTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATc                                                                                                                                 <  2:627796/157‑1 (MQ=255)                                                                                                                                                                                         aCAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTggcagaa                                              >  1:787376/1‑231 (MQ=255)                                                                                                                                                                                                cGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCt                                       >  1:499276/1‑236 (MQ=255)                                                                                                                                                                                                  aGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAAGTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCt                                                     >  2:578692/1‑220 (MQ=255)                                                                                                                                                                                                  aGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCTgg                                     >  1:496497/1‑236 (MQ=255)                                                                                                                                                                                                  aGCAATCGCAGTCCGTGCGTTTCAACCATGCCAAGGTGCGCCAGCCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTCCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGag                                                                                                       >  1:750477/1‑170 (MQ=255)                                                                                                                                                                                                    cAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGc                                         >  2:821027/1‑230 (MQ=255)                                                                                                                                                                                                    cAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCTg                                      <  2:499273/233‑1 (MQ=255)                                                                                                                                                                                                          cAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCTGGCACAGcc                              >  1:474401/1‑235 (MQ=255)                                                                                                                                                                                                            gTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTg                                                                                                                                           >  1:416780/1‑124 (MQ=255)                                                                                                                                                                                                            gTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCTGGCACAGCCATa                           <  1:370206/236‑1 (MQ=255)                                                                                                                                                                                                                   cGTTTCAACCATGCCAAGGGGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGgc                                                                          <  1:708142/182‑1 (MQ=255)                                                                                                                                                                                                                    gTTTCAACCATGCCAAGGTGCGCcaggccggcgaggcgtggccgaccc                                                                                                                                                                                                               >  1:837564‑M2/1‑23 (MQ=255)                                                                                                                                                                                                                    gTTTCAACCATGCCAAGGTGCGCcaggccggcgaggcgtggccgaccc                                                                                                                                                                                                               <  2:837561‑M2/48‑26 (MQ=255)                                                                                                                                                                                                                    gTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCGGCGCGCAACTGCGGCGGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgc                                                                                                              >  2:579984/1‑145 (MQ=255)                                                                                                                                                                                                                    gTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCTCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGaa                                                                                                                                                                      >  2:163707/1‑89 (MQ=255)                                                                                                                                                                                                                    gTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCTGGCACAGCCATAGCCTGCAg                   >  1:835872/1‑236 (MQ=255)                                                                                                                                                                                                                          aCCATGCCAAGGTGCGCcaggccggcgaggcgtggccgacccgcaccacctgattgggttcgcccttgccacagttgggcgtgcccagcacctggaaggtactgtggtcgccaaccgccgacaggttgcgccagaactgcgcggagatgccgcggtagttggggttcttgacgatgcccttga                                                                  <  1:229652‑M2/183‑167 (MQ=255)                                                                                                                                                                                                                           ccATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACCTGc                                                                                                                                          <  2:488391/110‑1 (MQ=255)                                                                                                                                                                                                                            cATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCTGGCACAGCCATAGCCTGCAGGAAcc              <  2:630740/233‑1 (MQ=255)                                                                                                                                                                                                                                 cAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCTGGCACAGCCATAGCCTGCAGGAACCCCCCCTGc      >  1:376418/1‑236 (MQ=255)                                                                                                                                                                                                                                  aaGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCTGGCACAGCCATAGCCTg                      >  2:572434/1‑219 (MQ=255)                                                                                                                                                                                                                                       gcgcCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCTGGCACAGCCATAGCCTGCAGGAACCCCCCCTGCCCGc  <  2:826654/234‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                       GGGCACGCCCAACTGTGGCAAGGGCGAACCCAATCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTGCGCCTGGACGAAAACGCCTGGCACAGCCATAGCCTGCAGGAACCCCCCCTGCCCGC  >  AE015451/5638801‑5639264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.