| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 1057115 = | 111 (1.290) | 5 (0.060) | 5/330 | NT | 5.1% | coding (957/2082 nt) | PP_0914 | GGDEF domain protein |
| ? | AE015451 | 1057250 = | 84 (1.050) | coding (822/2082 nt) | PP_0914 | GGDEF domain protein | |||||
TCGATCGAGCGCAACACCCATTTGCGCCACGAGGCGGAAAACAGCCTGCAGCGCATGGCCCAGTACGACTTCCTCACCGGCCTGCCCAACCGCCAGCAACTGCAGCAGCAACTGGACAAGATCCTCGTCGACGGCGGCCGCCTGCAGCACCGTGTGGCAGTGCTGTGCGTTGGCCTGGACGACTTCAAGGGTATCAACGAACAATTCAGCTACCAGGTCGGTGACCAGTTGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1057351‑1057115‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagttgctgctgCAGTTGCTGGCGGTTGGGCAGGCCGGTGAGGAAGTCGTACTGGGCCATGCGCTGCAGGCTGTTTTCCGCCTCGTGGCGCAAATGGGTGTTGCGCTCGATCGAGGCCAGCAACTGGTTGGCGGTGTTAACCCACAGGCCCAGCTCGTTTTTCTCGTGGCCCTTGAGCAGCGGTATCTGGTGCTGGCTGGGGCGGTCAGGGTTGATCTGGGTGAGGTGCTCGATGATCTTC > AE015451/1057250‑1057478 TCGATCGAGCGCAACACCCATTTGCGCCACGAGGCGGAAAACAGCCTGCAGCGCATGGCCCAGTACGACTTCCTCACCGGCCTGCCCAACCGCCAGCAACTGCAGCAGCAACTGGACAAGATCCTCGTCGACGGCGGCCGCCTGCAGCACCGTGTGGCAGTGCTGTGCGTTGGCCTGGACGACTTCAAGGGTATCAACGAACAATTCAGCTACCAGGTCGGTGACCAGTTGCTGCT > 1:1071473/1‑236 ACGAGGCGGAAAACAGCCTGCAGCGCATGGCCCAGTACGACTTCCTCACCGGCCTGCCCAACCGCCAGCAACTGCAGCAGCAACTGGACAAGATCCTCGTCGACGGCGGCCGCCTGCAGCACCGTGTGGCAGTGCTGTGCGTTGGCCTGGACGACTTCAAGGGTATCAACGAACAATTCAGCTACCAGGTCGGTGACCA < 1:1054883/199‑1 CGCCAGCAACGGCAGCAGCAACTGGACAAGATCCTCGTCGACGGCGGCCGCCTGCAGCACCGTGTGGCAGTGCTGTGCGTTGGCCTGGACGACTTCAAGGGTATCAACGAACAATTCAGCTACCAGGTCGGTGACCAGTTGCTGCTGCAGTTGCTGGCGGTTGGGCAGGCCGG < 1:365612/173‑1 GTCGACGGCGGCCGCCTGCAGCACCGTGTGGCAGTGCTGTGCGTTGGCCTGGACGACTTCAAGGGTATCAACGAACAATTCAGCTACCAGGTCGGTGACCAGTTGCTGCTGCAGTTGCTGGCGGTTGGGCAGGCCGGTGAGGAAGTCGTACTGGGCCATGCGC < 1:989801/163‑1 TCGACGGCGGCCGCCTGCAGCACCGTGTGGCAGTGCTGTGCGTTGGCCTGGACGACTTCAAGGGTATCAACGAACAATTCAGCTACCAGGTCGGTGACCAGTTGCTGCTGCAGTT < 2:384545/115‑1 GCCGCCTGCAGCACCGTGTGGCAGTGCTGTGCGTTGGCCTGGACGACTTCAAGGGTATCAACGAACAATTCAGCTACCAGGTCGGTGACCAGTTGCTGCTGCAGTTGCTGGCGGTTGGGCAGGCCGGTGAGG < 2:983873/132‑1 GGCAGTGCTGTGCGTTGGCCTGGACGACTTCAAGGGTATCAACGAACAATTCAGCTACCAGGTCGGTGACCAGTTGCTGCTGCAGTTGCTGGCGGTTGGGCAGGCCGGTGAGGAAGTCGTACTGGGCCATGCGCTGCAGGCTGTTTTCCGCCTCGTGGCGCAAATGGGTGTTGCGCTCGATCGAGGCCAGCAACTGGTTGGCGGTGTTAACCCACAGGCCCAGCTCGTTTTTC > 2:978803/1‑233 CTGTGCGTTGGCCTGGACGACTTCAAGGGTATCAACGAACAATTCAGCTACCAGGTCGGTGACCAGTTGCTGCTGCAGTTGCTGGCGGTTGGGCAGGCCGGTGAGGAAGTCGTACTGGGCCATGCGCTGCAGGCTGTTTTCCGCCTCGTGGCGCAAATGGGTGTTGCGCTCGATCGAGGCCAGCAACTGGTTGGCGGTGTTAACCCACAGGCCCAGCTCGTTTTTCTCGTGGCCCT < 1:978805/236‑1 CAGTTGCTGCTGCAGTTGGTGGCGGTTGGGGAGGCCGGGGAGGAAGGCGTACTGGGCCATGCGCTGCAGGCTGTTGTCCGCCTCGTGGCGCAAATGGGTGTTGCGCTCGATCGAGGCCAGCAACTGGTTGGCGGTGTTAACCCACAGGCCCAGCTCGTTTTTCTCGTGGCCCTTGAGCAGCGGTATCTGGTGCTGGCTGGGGC < 2:89271/203‑1 GTTGCTGCTGCAGTTGCTGGCGGTTGGGCAGGCCGGTGAGGAAGTCGTACTGGGCCATGCGCTGCAGGCTGTTTTCCGCCTCGTGGCGCAAATGGGTGTTGCGCTCGATCGAGGCCAGCAACTGGTTGGCGGTGTTAACCCACAGGCCCAGCTCGTTTTTCTCGTGGCCCTTGAGCAGCGGTATCTGGTGCTGGCTGGGGC < 2:136672/201‑1 TTGCTGCTGCAGTTGCTGGCGGTTGGGCAGGCCGGTGAGGAAGTCGTACTGGGCCATGCGCTGCAGGCTGTTTTCCGCCTCGTGGCGCAAATGGGTGTTGCGCTCGATCGAGGCCAGCAACTGGTTGGCGGTGTTAACCCACAGGCCCAGCTCGTTTTTCTCGTGGCCCTTGAGCAGCGGTATCTGGTGCTGGCTGGGGCGGTCA > 1:609564/1‑205 TTGCTGCTGCAGTTGCTGGCGGTTGGGCAGGCCGGTGAGGAAGTCGTACTGGGCCATGCGCTGCAGGCTGTTTTCCGCCTCGTGGCGCAAATGGGTGTTGCGCTCGATCGAGGCCAGCAACTGGTTGGCGGTGTTAACCCACAGGCCCAGCTCGTTTTTCTCGTGGCCCTTGAGCAGCGGTATCTGGTGCTGGCTGGGGCGGTCA < 2:609562/205‑1 CTGCTGCAGTTGCTGGCGGTTGGGCAGGCCGGTGAGGAAGTCGTACTGGGCCATGCGCTGCAGGCTGTTTTCCGCCTCGTGGCGCAAATGGGTGTTGCGCTCGATCGAGGCCAGCAACTGGTTGGCGGTGTTAACCCACAGGCCCAGCTCGTTTTTCTCGTGGCCCTTGAGCAGCGGTATCTGGTGCTGGCTGGGGCGGTCAGGGTTGATCTGGGTGAGGTGCTCGATGATCTTC > 1:1247420/1‑235 aTGCAGTTGCTGGCGGTTGGGCAGGCCGGTGAGGAAGTCGTACTGGGCCATGCGCTGCAGGCTGTTTTCCGCCTCGTGGCGCAAATGGGTGTTGCGCTCGATCGAGGCCAGCAACTGGTTGGCGGTGTTAACCCACAGGCCCAGCTCGTTTTTCTCGTGGCCCTTGAGCAGCGGTATCTGGTGCTGGCTGGGGCGGTCA < 1:1187295/198‑1 GCAGTTGCTGGCGGTTGGGCAGGCCGGGGAGGAAGTCGTACTGGGCCATGCGCTGCAGGCTGTTTTTCGCCTCGTG > 1:378435/1‑76 TCGATCGAGCGCAACACCCATTTGCGCCACGAGGCGGAAAACAGCCTGCAGCGCATGGCCCAGTACGACTTCCTCACCGGCCTGCCCAACCGCCAGCAACTGCAGCAGCAACTGGACAAGATCCTCGTCGACGGCGGCCGCCTGCAGCACCGTGTGGCAGTGCTGTGCGTTGGCCTGGACGACTTCAAGGGTATCAACGAACAATTCAGCTACCAGGTCGGTGACCAGTTGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1057351‑1057115‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagttgctgctgCAGTTGCTGGCGGTTGGGCAGGCCGGTGAGGAAGTCGTACTGGGCCATGCGCTGCAGGCTGTTTTCCGCCTCGTGGCGCAAATGGGTGTTGCGCTCGATCGAGGCCAGCAACTGGTTGGCGGTGTTAACCCACAGGCCCAGCTCGTTTTTCTCGTGGCCCTTGAGCAGCGGTATCTGGTGCTGGCTGGGGCGGTCAGGGTTGATCTGGGTGAGGTGCTCGATGATCTTC > AE015451/1057250‑1057478 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |