New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3056788 =	71 (0.830)	6 (0.080)	6/324	NT	8.7%	coding (560/990 nt)	PP_2669	putative Outer membrane protein
	?	AE015451	3056804 =	61 (0.780)					coding (544/990 nt)	PP_2669	putative Outer membrane protein

GCTGGCTGTATGTATCAAACGAGGACGATGCGCTGGTGACGGTGATCGACACCGTCACCGACAAGGTGCTCGGGCAGATCGAAGTCGGCATCGAACCCGAAGGCATGGCGGTCAGCCCCGACGGCAAGTGGGCGGTCAACACCAGCGAAACCACCAACATGCTGCACTGGATCGACACCAGCACCCAGACCCTGGCCGACAGCACGCTGGTCGACCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3057007‑3056788 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggtcgaccagcgTGCTGTCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGTCGATCAC  >  AE015451/3056804‑3056966                                                                                                                                                                                                                                                                                                                                                                                                 GCTGGCTGTATGTATCAAACGAGGACGATGCGCTGGTGACGGTGATCGACACCGTCACCGACAAGGTGCTCGGGCAGATCGAAGTCGGCATCGAACCCGAAGGCATGGCGGTCAGCCCCGACGGCAAGTGGGCGGTCAACACCAGCGAAACCACCAACATGCTGCACTGGATCGACACCAGCACCCAGACCCTGGCCGACAGCACGCTGGTCGACCAGCGTGCTGTCGGCCAGGGT                                                                                                                                                     <  1:730650/236‑1                      AGGACGATGCGCTGGTGACGGTGATCGACACCGTCACCGACAAGGTGCTCGGGCAGATCGAAGTCGGCATCGAACCCGAAGGCATGGCGGTCAGCCCCGACGGCAAGTGGGCGGTCAACACCAGCGAAACCACCAACATGCTGCACTGGATCGACACCAGCACCCAGACCCTGGCCGACAGCACGCTGGTCCACCAGCGTGCTGTCGGCC                                                                                                                                                          >  1:1374903/1‑210                                GCTGGTGACGGTGATCGACACCGTCACCGACAAGGTGCTCGGGCAGATCGAAGTCGGCATCGAACCCGAAGGCATGGCGGTCAGCCCCGACGGCAAGTGGGCGGTCAACACCAGCGAAACCACCAACATGCTGCACTGGATCGACACCAGCACCCAGACCCTGGCCGACAGCACGCTGGTCGAC                                                                                                                                                                          >  1:628/1‑184                                     TGACGGTGATCGACACCGTCACCGACAAGGTGCTCGGGCAGATCGAAGTCGGCATCGAACCCGAAGGCATGGCGGTCAGCCCCGACGGCAAGTGGGCGGTCAACACCAGCGAAACCACCAACATGCTGCACTGGATCGACACCAGCACCCAGACCCTGGCCGACAGCACGCTGGTCGACCAGCGTGCTGTCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGT                                                                                                                 <  1:1311141/236‑1                                                                                       GGCATCGAACCCGAAGGCATGGCGGTCAGCCCCGACGGCAAGTGGGCGGTCAACACCCGCGAAACCACCAACATGCTGCACTGGATCGACACCAGCACCCAGACCCTGGCCGACAGCACACCGGTCGACCcg                                                                                                                                                                       >  2:369554/1‑130                                                                                                            GCGGTCAGCCCCGACGGCAAGTGGGCGGTCAACACCAGCGAAACCACCAACATGCTGCACTGGATCGACACCAGCACCCAGACCCTGGCCGACAGCACGCTGGTCGACCAGCGTGCTGTCGGCCAGGGTCTGGG                                                                                                                                                <  2:1374900/134‑1                                                                                                                                        TCAACACCAGCGAAACCACCAACATGCTGCACTGGATCGACACCAGCACCCAGACCCTGGCCGACAGCACGCTGGTCGACCAGCGTGCTGTCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTT                                                                                                  >  2:769138/1‑152                                                                                                                                                                     CACTGGATCGACACCAGCACCCAGACCCTGGCCGACAGCACGCTGGTCGACCAGCGTGCTGTCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGT                                                       >  2:1507377/1‑166                                                                                                                                                                                                                            GTGCTGTCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGTCGATCAC  <  2:91959/164‑1                                                                                                                                                                                                                                                                                                                                                                                                 GCTGGCTGTATGTATCAAACGAGGACGATGCGCTGGTGACGGTGATCGACACCGTCACCGACAAGGTGCTCGGGCAGATCGAAGTCGGCATCGAACCCGAAGGCATGGCGGTCAGCCCCGACGGCAAGTGGGCGGTCAACACCAGCGAAACCACCAACATGCTGCACTGGATCGACACCAGCACCCAGACCCTGGCCGACAGCACGCTGGTCGACCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3057007‑3056788 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggtcgaccagcgTGCTGTCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGTCGATCAC  >  AE015451/3056804‑3056966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.