New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2639792 =	80 (0.930)	4 (0.050)	4/340	NT	5.2%	coding (865/1479 nt)	PP_2310	Methyl‑accepting chemotaxis transducer
	?	AE015451	2639812 =	69 (0.840)					coding (845/1479 nt)	PP_2310	Methyl‑accepting chemotaxis transducer

GGTTGCGCACTTCATCGGCCACCACGGCAAAGCCACGGCCTAGGTCGCCGGCGCGCGCGGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGCCCGAGTCCAGCTGTGCTGCGCTGTGGGCGACGGTGCTGACC  >  AE015451/2639558‑2640018                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                   cgccatgcagtccacctatcaccgcgtggtcagcaccgtcgcccacagcgcagcacagctggactcgggcgctgcacgcctggccgccagcatgagcgacgtacgccatggcatgctcggccagcagagtgaaaccgaccaggccgccactgccatcaacgaaatgtcggcgaccgtgcaccacattgcccagcacgccggtgccacccgcgatttgtcacaaaccgccgacacCt                                                                                                                                                                                                                                   <  1:262103‑M1/2‑1 (MQ=255)     gcgcACTTCATCGGCCACCACGGCAAAGCCACGGCCTAGGTCGCCGGCGCGCGCGGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTgg                                                                                                                                                                                                                                >  2:1073530/1‑235 (MQ=255)       gcagtccacctatcaccgcgtggtcagcaccgtcgcccacagcgcagcacagctggactcgggcgctgcacgcctggccgccagcatgagcgacgtacgccatggcatgctcggccagcagagtgaaaccgaccaggccgccactgccatcaacgaaatgtcggcgaccgtgcaccacattgcccagcacgccggtgccacccgcgatttgtcacaaaccgccgacacCTTGGCCg                                                                                                                                                                                                                             <  1:504039‑M1/8‑1 (MQ=255)         aCTTCATCGGCCACCACGGCAAAGCCACGGCCTAGGTCGCCGGCGCGCGCGGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGcc                                                                                                                                                                                                                              >  1:800686/1‑233 (MQ=255)          cTTCATCGGCCACCACGGCAAAGCCACGGCCTAGGTCGCCGGCGCGCGCGGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCt                                                                                                                                                                                                                           >  1:550765/1‑235 (MQ=255)                 ggCCACCACGGCAAAGCCACGGCCTAGGTCGCCGGCGCGCGCGGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCg                                                                                                                                                                                                                             <  1:1163791/226‑1 (MQ=255)                        acGGCAAAGCCACGGCCTAGGTCGCCGGCGCGCGCGGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAgcggta                                                                                                                                                                                                            >  1:827686/1‑231 (MQ=255)                        acGGCAAAGCCACGGCCTAGGTCGCCGGCGCGCGCGGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTc                                                                                                                                                                                                            >  1:1025228/1‑236 (MQ=255)                                       ccTAGGTCGCCGGCGCGCGCGGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCaa                                                                                                                                                                                                                  >  2:967460/1‑215 (MQ=255)                                                    cgcgcgcgGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTgg                                                                                                                                                                                  >  2:1092324/1‑234 (MQ=255)                                                    cgcgcgcgGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGc                                                                                                                                                                                 >  1:1399784/1‑235 (MQ=255)                                                      cgcgcgGCTTCGCTGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGTACTCGGCTGACCACCGCTTGGCCGc                                                                                                                                                                                                                            <  1:787930/190‑1 (MQ=255)                                                       gcgcgGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGc                                                                                                                                                                                                                         <  2:827684/192‑1 (MQ=255)                                                         gcgGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCAcc                                                                                                                                                                              <  2:1292033/233‑1 (MQ=255)                                                            gCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGc                                                                                                                                                                           <  2:1440546/233‑1 (MQ=255)                                                              gactcgggcgctgcacgcctggccgccagcatgagcgacgtacgccatggcatgctcggccagcagagtgaaaccgaccaggccgccactgccatcaacgaaatgtcggcgaccgtgcaccacattgcccagcacgccggtgccacccgcgatttgtcacaaaccgccgacacCTTGGCCg                                                                                                                                                                                                                             <  1:656730‑M1/8‑1 (MQ=255)                                                               tCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACCCTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCa                                                                                                                                                                                <  1:1420291/225‑1 (MQ=255)                                                                 gATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTgg                                                                                                                                                                    <  1:5941/235‑1 (MQ=255)                                                                           ttAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATgtggt                                                                                                                                                          <  1:596207/235‑1 (MQ=255)                                                                             cgcctggccgccagcatgagcgacgtacgccatggcatgctcggccagcagagtgaaaccgaccaggccaccactgccatcaacgaaatgtcggcgaccgtgcaccacattgcccagcacgccggtgccacccgcgatttgtcacaaaccgccgacacCTTGGCCg                                                                                                                                                                                                                             <  1:349191‑M1/8‑1 (MQ=255)                                                                                      cAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGcc                                                                                                                                               >  1:1383861/1‑235 (MQ=255)                                                                                        aGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCa                                                                                                                                                                 <  2:910716/215‑1 (MQ=255)                                                                                                  ttCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATgtggt                                                                                                                                                          <  2:1416550/212‑1 (MQ=255)                                                                                                     ggCAATACTTTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCa                                                                                                                                                                 <  2:536906/202‑1 (MQ=255)                                                                                                     ggCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCggggt                                                                                                                                                                                   >  1:315782/1‑182 (MQ=255)                                                                                                     ggCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTc                                                                                                                                       >  2:503723/1‑228 (MQ=255)                                                                                                     ggCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCAGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTTTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTCTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGa                                                                                                                                  <  2:1395743/233‑1 (MQ=255)                                                                                                       cAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTtgtg                                                                                                                                                                                                 >  2:676389/1‑168 (MQ=255)                                                                                                               tgGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGAcg                                                                                                                                                                                              >  1:275012/1‑162 (MQ=255)                                                                                                               tgGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCAcc                                                                                                                                                                              >  2:1509979/1‑179 (MQ=255)                                                                                                                    cacaCTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTcggcgggt                                                                                                                                                                                                     >  2:262101/1‑149 (MQ=255)                                                                                                                       acTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATcgc                                                                                                                                                                                        >  1:763041/1‑161 (MQ=255)                                                                                                                            cTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGtt                                                                                                           >  2:1328485/1‑233 (MQ=255)                                                                                                                              acacCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCAc                                                                                                       >  1:1096139/1‑235 (MQ=255)                                                                                                                              acacCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCAc                                                                                                       >  1:700436/1‑235 (MQ=255)                                                                                                                              acacCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGAATACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCAct                                                                                                      >  1:1329871/1‑236 (MQ=255)                                                                                                                               cacCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGc                                                                                                                                                <  2:100125/193‑1 (MQ=255)                                                                                                                                acCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCActc                                                                                                     <  1:830847/235‑1 (MQ=255)                                                                                                                                 ccGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCAct                                                                                                      <  1:350663/233‑1 (MQ=255)                                                                                                                                  cGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGccg                                                                                                                                                                                                                          >  2:463972/1‑114 (MQ=255)                                                                                                                                  agacagtcttctGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTctgc                                                                                                  <  1:252924/230‑1 (MQ=255)                                                                                                                                   tttGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATgtggt                                                                                                                                                          <  1:410341/178‑1 (MQ=255)                                                                                                                                   gTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTctgc                                                                                                  >  1:730204/1‑235 (MQ=255)                                                                                                                                    ttGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGt                                                                                                                                                                         <  2:378905/163‑1 (MQ=255)                                                                                                                                    ttGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTctgctg                                                                                                >  1:1430638/1‑236 (MQ=255)                                                                                                                                     tGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCa                                                                                                                                                                                <  1:681815/155‑1 (MQ=255)                                                                                                                                     ggATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGt                                                                                                                                                   <  2:923031/183‑1 (MQ=255)                                                                                                                                      gATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGGGGCACCGGCGTGCTcgg                                                                                                                                                                   >  1:277570/1‑167 (MQ=255)                                                                                                                                      accgaccaggccgccactgccatcaacgaaatgtcggcgaccgtgcaccacattgcccagcacgccggtgccacccgcgatttgtcacaaaccgccgacacCTTGGCCGCTGCCGGCCCAGGcgtcggcgggtt                                                                                                                                                                                                    <  1:293729‑M1/33‑4 (MQ=255)                                                                                                                                       aTCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGc                                                                                                                                                                           <  2:8337/158‑1 (MQ=255)                                                                                                                                        tcttctGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCGAGGTGTCGGCGGtgt                                                                                                                                                                                                    >  1:142432/1‑130 (MQ=255)                                                                                                                                        tcttctGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGAGAAATCGCTGGGGGCACCGGCGTGCGGGGCa                                                                                                                                                                 >  1:172015/1‑167 (MQ=255)                                                                                                                                        tcttctGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCa                                                                                                                                                                                <  2:848166/152‑1 (MQ=255)                                                                                                                                        tcttctGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCa                                                                                                                                                                                >  1:848168/1‑152 (MQ=255)                                                                                                                                        tcttctGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGcc                                                                                             >  1:1194335/1‑235 (MQ=255)                                                                                                                                        tcttctGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCg                                                                                            >  1:19652/1‑236 (MQ=255)                                                                                                                                         cttctGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGa                                                                                           <  1:1509982/236‑1 (MQ=255)                                                                                                                                              ggCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCAt                                                                                       <  1:494019/235‑1 (MQ=255)                                                                                                                                                 tGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGcc                                                                                    <  1:838019/235‑1 (MQ=255)                                                                                                                                                      tCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCgg                                                                                                                                                                            >  2:252922/1‑142 (MQ=255)                                                                                                                                                       cGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATgg                                                                                >  2:1051155/1‑233 (MQ=255)                                                                                                                                                         gCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGcc                                                                                             >  1:68326/1‑218 (MQ=255)                                                                                                                                                            agtaatCGAATCATCTCGGCAGGTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTc                                                                                                                                                                                                            >  2:990692/6‑104 (MQ=255)                                                                                                                                                                gTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTcggc                                                                                                                                                                                                         <  1:1438589/103‑1 (MQ=255)                                                                                                                                                                gTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCggg                                                                                                                                                                                     >  2:586632/1‑123 (MQ=255)                                                                                                                                                                cgaaatgtcggcgaccgtgcaccacattgcccagcacgccggtgccacccgcgatttgtcccaaaccgccgacacCTTGGCCGCTGCCGGCCAAGGTGTCGGCggtgt                                                                                                                                                                                                    <  1:85753‑M1/33‑3 (MQ=255)                                                                                                                                                                   gAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATg                                                                 <  1:682039/236‑1 (MQ=255)                                                                                                                                                                                aGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGCCTCCCGCTTGGc                                                                                                                                                                                                                               >  2:355549/1‑65 (MQ=255)                                                                                                                                                                                     gttgCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGGGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGc                                                >  1:785551/1‑235 (MQ=255)                                                                                                                                                                                       tgCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAAGCGCGGGTGGCACCGGCGTGCTGGGCa                                                                                                                                                                 <  2:1138120/120‑1 (MQ=255)                                                                                                                                                                                          aCGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCt                                                                                                                                                                      <  2:1235116/112‑1 (MQ=255)                                                                                                                                                                                            gccgcTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGccc                                         <  2:700434/235‑1 (MQ=255)                                                                                                                                                                                                     gccggtgccacccgcgatttgtcacaaaccgccgacacCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGGCGGTTTCa                                                                                                        <  1:963798‑M1/125‑1 (MQ=255)                                                                                                                                                                                                     acgcgcGGAATTCGAATCCTGCCCTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATgtggt                                                                                                                                                          <  2:482742/108‑1 (MQ=255)                                                                                                                                                                                                      aGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGCCCGAGTcc                                   >  2:888663/1‑231 (MQ=255)                                                                                                                                                                                                      aGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGCGTCACCGGCGTGCGGGGCAATGTGGTGCACGGTCGCCGACATTTc                                                                                                                                       >  2:119222/1‑131 (MQ=255)                                                                                                                                                                                                          tgccacccgcgatttgtcacaaaccgccgacacCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTggcgg                                                                                                                      <  2:1208918‑M1/111‑1 (MQ=255)                                                                                                                                                                                                           ggAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCa                                                                                        >  2:722308/1‑173 (MQ=255)                                                                                                                                                                                                           ggAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGCCCggg                                      >  1:1033214/1‑221 (MQ=255)                                                                                                                                                                                                            gAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGCCCGAGTCCAGCTGtgctgc                        <  1:1073533/236‑1 (MQ=255)                                                                                                                                                                                                                tCGACTCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGa                                                                                           <  2:175645/165‑1 (MQ=255)                                                                                                                                                                                                                   aaTCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGCCCGAGTCCAGCTGTGCTGCGCTGTgg                 <  1:1328488/236‑1 (MQ=255)                                                                                                                                                                                                                       cTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGCCCGAGTCCAGCTGTGCTGCGCTGTggg                <  2:1199058/233‑1 (MQ=255)                                                                                                                                                                                                                           aCTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGCCCGa                                       <  2:1194332/206‑1 (MQ=255)                                                                                                                                                                                                                            cTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAgca                                                    <  1:1092327/192‑3 (MQ=255)                                                                                                                                                                                                                              cGGCTGACTACGGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGCCCGAGTCCAGCTGTGCTGCGCTGTggg                <  2:1287669/226‑1 (MQ=255)                                                                                                                                                                                                                               ggCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGCCCGAGTCCAGCTGTGCTGCGCTGTGGGCGACGGTGCt      <  1:526879/235‑1 (MQ=255)                                                                                                                                                                                                                                  tGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGt                                                                         >  2:1477711/1‑165 (MQ=255)                                                                                                                                                                                                                                   gACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGCCCGAGTCCAGCTGTGCTGCGCTGTGGGCGACGGTGCTGAcc  <  1:967462/235‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                   GGTTGCGCACTTCATCGGCCACCACGGCAAAGCCACGGCCTAGGTCGCCGGCGCGCGCGGCTTCGATGGCAGCGTTAAGCGCCAGCAAGTTGGTCTGTTCGGCAATACTGTGGATCACACTGACTACACCGTTGATCTTCTGGCTGTCCTCGGCTAGTTGTCGAATCATCTCGGCAGTTTGTTGCACGCCGCTGGAAAGCCCGGAAATCGAATCCTGCACTCGGCTGACTACCGCTTGGCCGCTGCCGGCCAAGGTGTCGGCGGTTTGTGACAAATCGCGGGTGGCACCGGCGTGCTGGGCAATGTGGTGCACGGTCGCCGACATTTCGTTGATGGCAGTGGCGGCCTGGTCGGTTTCACTCTGCTGGCCGAGCATGCCATGGCGTACGTCGCTCATGCTGGCGGCCAGGCGTGCAGCGCCCGAGTCCAGCTGTGCTGCGCTGTGGGCGACGGTGCTGACC  >  AE015451/2639558‑2640018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.