New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 336232 | 51 (0.740) | 5 (0.090) | 4/284 | NT | 10.1% | intergenic (+80/+313) | PP_0278/PP_0279 | conserved protein of unknown function/conserved protein of unknown function |
? | AE015451 | = 336298 | 46 (0.800) | intergenic (+146/+247) | PP_0278/PP_0279 | conserved protein of unknown function/conserved protein of unknown function |
CCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/335987‑336232 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgtgggagcggccttgcgtcgcgaaAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCACAAATGACCGCGTCAATGCCTAATGCGCCTTACCCTTGGCGATCTCGATATCGTTCATCAGCGCCTTGGCCATGTCGCACAGGT‑ATCGGCTGCCCCCAGGAATTTATGGTCGTCCTCCATATCGCCCTCGCGCACCAGG < AE015451/336298‑336071 CCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGG > 2:611364/1‑233 CTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGGAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGC > 1:144660/1‑233 ACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGGGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCG < 2:672018/233‑1 ACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTT > 1:346381/1‑225 TCCCCGTCGACGCGGCCTACGAGCATGGCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTG < 2:1135992/209‑1 GTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGG < 2:1162109/193‑1 gCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGG < 2:449620/191‑1 ACGGGCATGTCTCGATCCTGATGGGCTACAGCAAGCGCCGGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAT < 2:219195/174‑1 TCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGGAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCG > 2:265363/1‑184 CTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCTCCAAGGGTAAGGCGCAGTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGT > 2:317875/1‑184 CTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTC > 1:561918/1‑185 CGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGAGAGCGGCCTTGCGgc > 2:395848/1‑181 CTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGGCGCGA > 1:997571/1‑182 ttATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCTGCCTT < 1:1180070/170‑1 GGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTG > 2:577681/1‑156 CATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGA > 2:731271/1‑171 CATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGG > 2:1024120/1‑152 CATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGT > 2:255978/1‑150 GTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCG > 2:493182/1‑152 GCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCT > 2:607590/1‑146 CGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGg > 2:447186/1‑129 CATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGTAGCGGCCGTGC > 2:606493/1‑124 CATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGTAGC > 1:11518/1‑116 CATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGG > 2:815764/1‑112 CATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGG < 1:815767/112‑1 tcCCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCT < 1:189241/162‑1 GAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGG > 2:1252767/1‑130 GAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGG < 1:1252770/130‑1 GCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCT < 2:45882/119‑1 GCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCCCCAATGACCGCGTCAAAGCCTAATGCGCCTTACCCTTGG > 2:224719/1‑162 TTTGTGGGAGCGGCCTTGCGT > 2:1062223/1‑21 CGGCCTTGCGTCGCGAAAGGGCCGCAACGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCACAAATGACCGCGTCAATGCCTAATGCGCCTTACCCTTGGCGATCTCGATATCGTTCATCAGCGCCTTGGCCATGTCGCACAGGTAATCGGCTGCCCCCAGGAATTTATGGTCGTCCTCCATATCGCCCTC < 1:167104/236‑1 CGGCCTTGCGTCGCGAAAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCACAAATGACCGCGTCAATGCCTAATGCGCCTTACCCTTGGCGATCTCGATATCGTTCATCAGCGCCTTGGCCATGTCGCACAGGTAATCGGCTGCCCCCAGGAATTTATG < 1:701109/215‑1 GGCCTTGCGTCGCGAAAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCACAAATGACCGCGTCAATGCCTAATGCGCCTTACCCTTGGCGATCTCGATATCGTTCATC > 2:1225447/1‑164 GGCCTTGCGTCGCGAAAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCACAAATGACCGCGTCAATGCCTAATGCGACTTACCCT > 2:65869/1‑141 GGCCGTGCTTCGCGAAAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCACAAATGACCGCGTCAATGCCTAATGCGCCTTACCCTTGGCGATCTCGATATCGTTCATCAGCGCCTTGGCCATGTCGCACAGGTAATCGGCTGCCCCCAGGAATTTATG < 1:105693/214‑1 GTCGCAAAAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCACAAATGACCGCGTCAATGCCTAATGC < 1:1283141/123‑1 AAAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGC > 1:816182/1‑73 AAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCACAAATGACCGCGTCAATGCCTAATGCGCCTTACCCTTGGCGATCTCGATATCGTTCATCAGCGCCTTGGCCATGTCGCACAGGTAATCGGCTGCCCCCAGGAATTTATGGTCGTCCTCGATATCGCCCTCGCGCACCAGG > 2:638845/1‑230 AAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCACAAATGACCGCGTCAATGCCTAATGCGCCTTACCCTTGGCGATCTCGATATCGTTCATCAGCGCCTTGGCCATGTCGCACAGGTAATCGGCTGCCCCCAGGAATT > 1:445524/1‑195 AAGGCCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTC < 2:488542/87‑1 CCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/335987‑336232 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgtgggagcggccttgcgtcgcgaaAGGGCCGCAAAGCGGCCCCCGTTTTCAGCGCAATCTCTGAAATCGCCGGGGCTGCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCACAAATGACCGCGTCAATGCCTAATGCGCCTTACCCTTGGCGATCTCGATATCGTTCATCAGCGCCTTGGCCATGTCGCACAGGT‑ATCGGCTGCCCCCAGGAATTTATGGTCGTCCTCCATATCGCCCTCGCGCACCAGG < AE015451/336298‑336071 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |