New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 336232	51 (0.740)	5 (0.090)	4/284	NT	10.1%	intergenic (+80/+313)	PP_0278/PP_0279	conserved protein of unknown function/conserved protein of unknown function
	?	AE015451	= 336298	46 (0.800)					intergenic (+146/+247)	PP_0278/PP_0279	conserved protein of unknown function/conserved protein of unknown function

GCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑T‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAA  >  AE015451/336001‑336461                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                      gcgTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATgg                                                                                                                                                                                                                                    >  1:1071976/1‑236 (MQ=255)   gTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATggg                                                                                                                                                                                                                                   <  1:820299/235‑1 (MQ=255)              cGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAagcagc                                                                                                                                                                                                                       >  1:508311/1‑236 (MQ=255)               gTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGcc                                                                                                                                                                                                                      >  1:1180015/1‑236 (MQ=255)                            cgGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGccc                                                                                                                                                                                                                     <  1:44297/224‑1 (MQ=255)                                      gCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATggg                                                                                                                                                                                                                                   <  2:485832/200‑1 (MQ=255)                                            ctcGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGTCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCgg                                                                                                                                                                                                               >  2:623306/1‑213 (MQ=255)                                            ctcGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGAttt                                                                                                                                                                                                            >  1:1225450/1‑217 (MQ=255)                                            ctcGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGAt                                                                                                                                                                                                              >  2:737580/1‑215 (MQ=255)                                            ctcGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCCGAGATTGCGCTGAAAAc                                                                                                                                                                                         >  1:224719/1‑236 (MQ=255)                                            ctcGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAAc                                                                                                                                                                                         >  1:644261/1‑236 (MQ=255)                                                aTCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACgggg                                                                                                                                                                                     <  1:253715/236‑1 (MQ=255)                                                    tGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGAt                                                                                                                                                                                                     >  1:1193520/1‑216 (MQ=255)                                                         ggCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGcc                                                                                                                                                                                  >  1:1211318/1‑230 (MQ=255)                                                                       ccTGGTGCGCGAGGGCGATATCGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTt                                                                                                                                                                    >  2:638845‑M2/1‑229 (MQ=255)                                                                        cgggTGCGCGAGGGCGATATGGAGGACGACCAGAAATTCCTGGGGGCAGCCGAGT‑ACCTGTGCGACATGGCTCAGGCGCTGATGAACGGTATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATggg                                                                                                                                                                                                                                   <  2:218605/164‑1 (MQ=255)                                                                            tGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAagcagc                                                                                                                                                                                                                       >  1:1132701/1‑174 (MQ=255)                                                                              cgcgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCaaa                                                                                                                                                                                                                            >  2:260614/1‑167 (MQ=255)                                                                              cgcgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGccc                                                                                                                                                                                                                     >  2:80892/1‑174 (MQ=255)                                                                              cgcgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGccc                                                                                                                                                                                                                     <  1:80892/174‑1 (MQ=255)                                                                                 gAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGaa                                                                                                                                                                                            >  2:617455/1‑196 (MQ=255)                                                                                 gAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGaa                                                                                                                                                                                            <  1:617458/196‑1 (MQ=255)                                                                                 gAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCGTTGCGGCCCTttcgcgacgcaaggccg                                                                                                                                                    <  1:167104‑M2/236‑18 (MQ=255)                                                                                   gggCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCACCGGCg                                                                                                                                                                                                                >  2:56528/1‑174 (MQ=255)                                                                                              aggaCGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGc                                                                                                                                       <  1:291892/236‑1 (MQ=255)                                                                                                  cgacCATAAATTCCTGGGTGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGCGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGAttt                                                                                                                                                                                                            >  2:1219659/1‑163 (MQ=255)                                                                                                      cATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGag                                                                                                                                                                                                              >  1:46967/1‑156 (MQ=255)                                                                                                      cATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCCAGGCCGCTCCCACaaaa                                                                                                                                         >  1:978843/1‑226 (MQ=255)                                                                                                      cATAAATTCCTGGGGGCAGCCGA‑TTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccg                                                                                                                                                    <  1:701109‑M2/215‑18 (MQ=255)                                                                                                      cATAAATTCCTGGGGGCAGCCGA‑TTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgaagcacggcc                                                                                                                                                     <  1:105693‑M2/214‑17 (MQ=255)                                                                                                        tAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTgc                                                                                                                                <  2:1071973/233‑1 (MQ=255)                                                                                                          aaTTCCTGGGGGCAGCCGA‑TTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTt                                                                                                                                                                    >  1:445524‑M2/1‑194 (MQ=255)                                                                                                                  ggggCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGCGCGGCCTTGCGGCGCGAAGGGGCTg                                                                                                                                                                                                                                >  2:213515/1‑127 (MQ=255)                                                                                                                  ggggCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCg                                                                                                                                                                                 >  1:697624/1‑174 (MQ=255)                                                                                                                   gggCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGGATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAg                                                                                                                    <  2:1211315/234‑1 (MQ=255)                                                                                                                          cgatt‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACca                                                                                                                        >  1:186972/5‑223 (MQ=255)                                                                                                                               tccctgTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgct                                                                                                                                                                               <  1:189241‑M1/162‑57 (MQ=255)                                                                                                                                aCCTGTGCGACATGGCCAAGGCGCTGAGGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACgggg                                                                                                                                                                                     <  2:242866/157‑1 (MQ=255)                                                                                                                                       cGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCgg                                                                                                                                                                                                                  >  2:410632/1‑121 (MQ=255)                                                                                                                                       cGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGtt                                                                                                             >  1:65097/1‑222 (MQ=255)                                                                                                                                             ggCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTa                                                                                                                            <  2:697621/201‑1 (MQ=255)                                                                                                                                               ccAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGAtt                                                                                                                                                                                                             >  2:450703/1‑118 (MQ=255)                                                                                                                                                      gcTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGTAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGc                                                                                                                                                                                >  2:149771/1‑140 (MQ=255)                                                                                                                                                       cTGATGAACGATATCGAGATCGCCAAGGGTAAGGGGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGaaa                                                                                                                 <  1:1196784/202‑1 (MQ=255)                                                                                                                                                         gatgaACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggcc                                                                                                                                                     >  2:1225447‑M2/1‑148 (MQ=255)                                                                                                                                                         gatgaACGATATCGAGATCGACAAGGGTAATGCGCATTAGGCATTGACGCGTTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGccc                                                                                                                                                                                                                     <  1:272032/100‑1 (MQ=255)                                                                                                                                                            gaACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccgggg                                                                                                                                                                                    >  2:1252767‑M1/1‑79 (MQ=255)                                                                                                                                                            gaACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccgggg                                                                                                                                                                                    <  1:1252770‑M1/130‑52 (MQ=255)                                                                                                                                                                 atatCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACcaca                                                                                                                      <  1:24079/187‑1 (MQ=255)                                                                                                                                                                   atCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACaa                                                                                                                     <  2:666891/186‑1 (MQ=255)                                                                                                                                                                       agaTCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGTAGCGGCCTTGCGTCGCGAATGGGCTCCAAAACCGCCCCGGCGATTTCAGAGATTgc                                                                                                                                                                                                  >  1:416959/1‑105 (MQ=255)                                                                                                                                                                            gCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgct                                                                                                                                                                               <  2:45882‑M1/119‑57 (MQ=255)                                                                                                                                                                             ccAAGGGTAAGGCGCATTAGGCTTTGACGCGGTCATTGGGGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccgctcccacaaatgaccgc                                                                                                                                   >  2:224719‑M2/1‑128 (MQ=255)                                                                                                                                                                             ccAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGGCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGAtt                                                                                                                                                                                                    <  2:373059/97‑1 (MQ=255)                                                                                                                                                                                aGGGTAAGTCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggcc                                                                                                                                                     >  2:65869‑M2/1‑125 (MQ=255)                                                                                                                                                                                         cgcATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGcc                                                                                                                                                                                  >  2:331244/1‑103 (MQ=255)                                                                                                                                                                                          gcATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTtttgcgac                                                                                                                                                             <  1:1283141‑M2/123‑9 (MQ=255)                                                                                                                                                                                          gcATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCg                                                                   >  1:918832/1‑213 (MQ=255)                                                                                                                                                                                               aGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGa                                                                                                                   >  1:75194/1‑160 (MQ=255)                                                                                                                                                                                                ggCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGGTTATGca                                                                                                       >  2:1276876/1‑171 (MQ=255)                                                                                                                                                                                                        cgcgGTCATTTTTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTGTGCGGCCCTTTCGCGGCGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCg                                                              >  1:306821/1‑204 (MQ=255)                                                                                                                                                                                                         gcgGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctccccccaatgaccgcgtcaaagcctaatgcgccttacccttgg                                                                                                       >  2:224719‑M1/1‑34 (MQ=255)                                                                                                                                                                                                                 gtgtgGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTGCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGa                                                                                       <  2:293950/169‑1 (MQ=255)                                                                                                                                                                                                                       gAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGGCCTt                                                                                                                                                                    <  2:488542‑M2/87‑2 (MQ=255)                                                                                                                                                                                                                          cGGCCTTGCGTCGCGAAagggccgcaacgcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatcagcgccttggccatgtcgcacaggtaatcggctgcccccaggaatttatggtcgtcctccatatcgccctc            <  1:167104‑M1/236‑220 (MQ=255)                                                                                                                                                                                                                          cGGCCTTGCGTCGCGAAagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatcagcgccttggccatgtcgcacaggtaatcggctgcccccaggaatttatg                                 <  1:701109‑M1/215‑199 (MQ=255)                                                                                                                                                                                                                          cGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGcc             >  1:482566/1‑235 (MQ=255)                                                                                                                                                                                                                           ggCCTTGCGTCGCGAAagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatc                                                                                   >  2:1225447‑M1/1‑16 (MQ=255)                                                                                                                                                                                                                           ggCCTTGCGTCGCGAAagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgacttaccct                                                                                                          >  2:65869‑M1/1‑16 (MQ=255)                                                                                                                                                                                                                           ggCCGTGCTTCGCGAAagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatcagcgccttggccatgtcgcacaggtaatcggctgcccccaggaatttatg                                 <  1:105693‑M1/214‑199 (MQ=255)                                                                                                                                                                                                                            gCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCt                                                            >  2:610441/1‑186 (MQ=255)                                                                                                                                                                                                                            gCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCt                                                            <  1:610444/186‑1 (MQ=255)                                                                                                                                                                                                                             ccTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTCGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCaatc                                     >  1:1212144/1‑206 (MQ=255)                                                                                                                                                                                                                             ccTTGCCTCGCGAATGGGCTGCAAAGCAGCCTCGGCGATTTCAGAGTTTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCCCAAAAGCCGCt                                                                                                                                   >  2:178435/1‑114 (MQ=37)                                                                                                                                                                                                                                   gTCGCAAAagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgc                                                                                                                    <  1:1283141‑M1/123‑116 (MQ=255)                                                                                                                                                                                                                                    tCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGAAGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAATAAATGtt                                                                                                             >  2:521710/1‑129 (MQ=255)                                                                                                                                                                                                                                      gcgAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTtt                                                                                                                                                                   >  1:816182‑M2/1‑71 (MQ=255)                                                                                                                                                                                                                                        gAATGGGCTGCAAAGCAGCCCCGGGGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCAtt                                                                                            <  1:833657/142‑1 (MQ=255)                                                                                                                                                                                                                                         aaagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgc                                                                                                                                                                >  1:816182‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                          aagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatcagcgccttggccatgtcgcacaggtaatcggctgcccccaggaatttatggtcgtcctcgatatcgccctcgcgcaccagg  >  2:638845‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                          aagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatcagcgccttggccatgtcgcacaggtaatcggctgcccccaggaatt                                     >  1:445524‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                          aaggcccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctc                                                                                                                                                 <  2:488542‑M1/87‑87 (MQ=255)                                                                                                                                                                                                                                          aTGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACaa                                                                                                                     <  2:124761/115‑1 (MQ=255)                                                                                                                                                                                                                                          aTGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACaa                                                                                                                     >  1:124761/1‑115 (MQ=255)                                                                                                                                                                                                                                          aTGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTg                                            >  1:898924/1‑188 (MQ=255)                                                                                                                                                                                                                                          aTGGGCTGCAAAGCAGCCCCGGCGATTTCAGAG‑TTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTgg                                                                                         <  2:772780/142‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                      GCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑T‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAA  >  AE015451/336001‑336461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.