New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 336232	51 (0.740)	5 (0.090)	4/284	NT	10.1%	intergenic (+80/+313)	PP_0278/PP_0279	conserved protein of unknown function/conserved protein of unknown function
	?	AE015451	= 336298	46 (0.800)					intergenic (+146/+247)	PP_0278/PP_0279	conserved protein of unknown function/conserved protein of unknown function

CCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑T‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGAAATAGCGCTTGGATCCAACAGGTAATCACAAGCTTGTTCACAGACTTATCCACA  >  AE015451/336071‑336531                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          ccTGGTGCGCGAGGGCGATATCGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTt                                                                                                                                                                                                                                          >  2:638845‑M2/1‑229 (MQ=255)           gAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCGTTGCGGCCCTttcgcgacgcaaggccg                                                                                                                                                                                                                          <  1:167104‑M2/236‑18 (MQ=255)                        aggaCGACCATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGc                                                                                                                                                                                                             <  1:291892/236‑1 (MQ=255)                                cATAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCCAGGCCGCTCCCACaaaa                                                                                                                                                                                                               >  1:978843/1‑226 (MQ=255)                                cATAAATTCCTGGGGGCAGCCGA‑TTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccg                                                                                                                                                                                                                          <  1:701109‑M2/215‑18 (MQ=255)                                cATAAATTCCTGGGGGCAGCCGA‑TTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgaagcacggcc                                                                                                                                                                                                                           <  1:105693‑M2/214‑17 (MQ=255)                                  tAAATTCCTGGGGGCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTgc                                                                                                                                                                                                      <  2:1071973/233‑1 (MQ=255)                                    aaTTCCTGGGGGCAGCCGA‑TTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTt                                                                                                                                                                                                                                          >  1:445524‑M2/1‑194 (MQ=255)                                             gggCAGCCGATT‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGGATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAg                                                                                                                                                                                          <  2:1211315/234‑1 (MQ=255)                                                    cgatt‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACca                                                                                                                                                                                              >  1:186972/5‑223 (MQ=255)                                                                 cGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGtt                                                                                                                                                                                   >  1:65097/1‑222 (MQ=255)                                                                       ggCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTa                                                                                                                                                                                                  <  2:697621/201‑1 (MQ=255)                                                                                 cTGATGAACGATATCGAGATCGCCAAGGGTAAGGGGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGaaa                                                                                                                                                                                       <  1:1196784/202‑1 (MQ=255)                                                                                   gatgaACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggcc                                                                                                                                                                                                                           >  2:1225447‑M2/1‑148 (MQ=255)                                                                                           atatCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACcaca                                                                                                                                                                                            <  1:24079/187‑1 (MQ=255)                                                                                             atCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACaa                                                                                                                                                                                           <  2:666891/186‑1 (MQ=255)                                                                                                       ccAAGGGTAAGGCGCATTAGGCTTTGACGCGGTCATTGGGGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccgctcccacaaatgaccgc                                                                                                                                                                                                         >  2:224719‑M2/1‑128 (MQ=255)                                                                                                          aGGGTAAGTCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggcc                                                                                                                                                                                                                           >  2:65869‑M2/1‑125 (MQ=255)                                                                                                                    gcATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTtttgcgac                                                                                                                                                                                                                                   <  1:1283141‑M2/123‑9 (MQ=255)                                                                                                                    gcATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCg                                                                                                                                         >  1:918832/1‑213 (MQ=255)                                                                                                                         aGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGa                                                                                                                                                                                         >  1:75194/1‑160 (MQ=255)                                                                                                                          ggCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGGTTATGca                                                                                                                                                                             >  2:1276876/1‑171 (MQ=255)                                                                                                                                  cgcgGTCATTTTTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTGTGCGGCCCTTTCGCGGCGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCg                                                                                                                                    >  1:306821/1‑204 (MQ=255)                                                                                                                                           gtgtgGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTGCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGa                                                                                                                                                             <  2:293950/169‑1 (MQ=255)                                                                                                                                                 gAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGGCCTt                                                                                                                                                                                                                                          <  2:488542‑M2/87‑2 (MQ=255)                                                                                                                                                    cGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGcc                                                                                   >  1:482566/1‑235 (MQ=255)                                                                                                                                                      gCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCt                                                                                                                                  >  2:610441/1‑186 (MQ=255)                                                                                                                                                      gCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCt                                                                                                                                  <  1:610444/186‑1 (MQ=255)                                                                                                                                                       ccTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTCGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCaatc                                                                                                           >  1:1212144/1‑206 (MQ=255)                                                                                                                                                       ccTTGCCTCGCGAATGGGCTGCAAAGCAGCCTCGGCGATTTCAGAGTTTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCCCAAAAGCCGCt                                                                                                                                                                                                         >  2:178435/1‑114 (MQ=37)                                                                                                                                                              tCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGAAGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAATAAATGtt                                                                                                                                                                                   >  2:521710/1‑129 (MQ=255)                                                                                                                                                                gcgAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTtt                                                                                                                                                                                                                                         >  1:816182‑M2/1‑71 (MQ=255)                                                                                                                                                                  gAATGGGCTGCAAAGCAGCCCCGGGGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCAtt                                                                                                                                                                  <  1:833657/142‑1 (MQ=255)                                                                                                                                                                   aaggggCAGCAAGGCAGCCCCGGGGATTTGAGACAGTGGCCTGAAACCGGGGGGCGCTTTGCGGCCGTTTCGCGCCGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACaa                                                                                                                                                                          <  1:606496/130‑1 (MQ=255)                                                                                                                                                                    aTGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACaa                                                                                                                                                                                           <  2:124761/115‑1 (MQ=255)                                                                                                                                                                    aTGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACaa                                                                                                                                                                                           >  1:124761/1‑115 (MQ=255)                                                                                                                                                                    aTGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTg                                                                                                                  >  1:898924/1‑188 (MQ=255)                                                                                                                                                                    aTGGGCTGCAAAGCAGCCCCGGCGATTTCAGAG‑TTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTgg                                                                                                                                                               <  2:772780/142‑1 (MQ=255)                                                                                                                                                                           gCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGc                                                                             <  1:492626/218‑1 (MQ=255)                                                                                                                                                                               agcagcCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatcagcgccttggccatgtcgcacaggga                                                                                                                               <  1:189241‑M2/164‑109 (MQ=255)                                                                                                                                                                               agcagcCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggc                                                                                                                                                                            <  2:45882‑M2/119‑64 (MQ=255)                                                                                                                                                                                    ccccGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttc                                                                                                                                                            >  2:1252767‑M2/1‑51 (MQ=255)                                                                                                                                                                                    ccccGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttc                                                                                                                                                            <  1:1252770‑M2/130‑80 (MQ=255)                                                                                                                                                                                    ccccGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAg                                                                              >  2:1239624/1‑208 (MQ=255)                                                                                                                                                                                      ccGGCGATTGCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGa                                                                                                                                                        <  1:727447/132‑1 (MQ=255)                                                                                                                                                                                       cGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGAAATAGCGCt                                               >  1:1244874/1‑236 (MQ=255)                                                                                                                                                                                         gCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTGGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGa                                                                         >  2:1095302/1‑208 (MQ=255)                                                                                                                                                                                          cGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAg                                                               <  2:1180012/217‑1 (MQ=255)                                                                                                                                                                                           gATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGcc                                                                                                                                          <  2:65097/141‑1 (MQ=255)                                                                                                                                                                                                      gtGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGAAATAgc                                                  <  1:611367/217‑1 (MQ=255)                                                                                                                                                                                                         cgcTGAAAAGGGGGGCCGCTTTGCGGCCCTTTCGCGGCGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGa                                                                                                                                                    <  1:607593/117‑1 (MQ=255)                                                                                                                                                                                                         cgcTGAAAACGGGGGCCGCTTTGCTGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCaaa                                                                                                            <  1:224487/157‑1 (MQ=255)                                                                                                                                                                                                          gcTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAg                                                                              >  2:831827/1‑186 (MQ=255)                                                                                                                                                                                                          gcTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAg                                                                    >  2:1232217/1‑196 (MQ=255)                                                                                                                                                                                                              aaaaCGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGcac                                                                                                                                                                            >  2:1117619/1‑88 (MQ=255)                                                                                                                                                                                                              aaaaCGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGcac                                                                                                                                                                            <  1:1117622/88‑1 (MQ=255)                                                                                                                                                                                                                 aCGGGGGCCGCTTTGCGGCCCTTCCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTgc                                                                                                                 <  2:158525/144‑1 (MQ=255)                                                                                                                                                                                                                     gggCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGAAATAGCGCTTGGATCCAACa                                    <  2:482563/217‑1 (MQ=255)                                                                                                                                                                                                                        ccGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGAAATAGCGCTTGGATCCAACAGGTAATCACAAGCTTGTTcaca              <  1:1232220/236‑1 (MQ=255)                                                                                                                                                                                                                           cTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGa                                                        >  2:522417/1‑191 (MQ=255)                                                                                                                                                                                                                             ttGCGGCCCTTTCGCGCCGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGcc                                                                                                        <  1:488545/141‑1 (MQ=255)                                                                                                                                                                                                                             gtGCGGACCTTTCGCAACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGAAATAGCGCTTGGATCCAACAGGTAATCACAAGCTTGTTc                 <  2:701106/227‑1 (MQ=255)                                                                                                                                                                                                                                 ggCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGAAATAGCGCTTGGATCCAACAGGTAATc                             <  1:66904/212‑1 (MQ=255)                                                                                                                                                                                                                                  ggccTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCaaa                                                                                                            <  2:585844/130‑1 (MQ=255)                                                                                                                                                                                                                                   cccTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGATAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGAAATAGCGCTTGGATCCAACAGGTAATCACAAGCTTGTTCACAGACTTATCcac   <  1:1176276/236‑1 (MQ=255)                                                                                                                                                                                                                                    ccTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGAAATAGCGCTTGGATCCAACAGGTAATCACAAGCTTGTTCACAGACTTATCcaca  <  1:1219662/236‑1 (MQ=255)                                                                                                                                                                                                                                     cTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGAAATAGCGCTTGGATCCAACAGGTAATCACAAGCTTGTTCACAGAc           <  1:289692/226‑1 (MQ=255)                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          CCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑T‑ACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAAGCGCTTGAAATAGCGCTTGGATCCAACAGGTAATCACAAGCTTGTTCACAGACTTATCCACA  >  AE015451/336071‑336531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.