New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1260043 =	56 (0.820)	4 (0.060)	4/320	NT	7.0%	coding (1408/2451 nt)	PP_1103	ATP‑dependent helicase, DEAD box family
	?	AE015451	1260090 =	53 (0.820)					coding (1361/2451 nt)	PP_1103	ATP‑dependent helicase, DEAD box family

GTACAGCATCTGGTCAGCATGGCCTTGGGCAGCGGTTTTCGCCCGGAGCAACTGCTCGCCGAAGTGCGCAGCACCTGGGCTTTTCGCCAGTTGCGCGACAGCCAATGGCAATGGGCGCTGGACTTCGTCTGCCACGGCGGCAGCTCATTGACCGCCTACCCGGACTACCAGCGTGTCGAGCGCCAGGCCGACGGAGTTTACCGGGTTACCAGCGAACGCCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1260268‑1260043 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggcgcTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCACGTCCATGCACAGGCGCGGTGAAAAGCGGGCTTCGATG  >  AE015451/1260090‑1260311                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTACAGCATCTGGTCAGCAAGGCCTTGGGCAGCGGTTTTCGCCCGGAGCAACTGCTCGCCGAAGTGCGCAGCACCTGGGCTTTTCGCCAGTTGCGCGACAGCCAATGGCAATGGGCGCTGGACTTCGTCTGCCACGGCGGCAGCTCATTGACCGCCTACCCGGACTACCAGCGTGTCGAGCGCCAGGCCGACGGAGTTGACCGGGTTACCAGCGAACGCat                                                                                                                                                                                                                                     >  1:1186356/1‑219                                                       CTCGCCGAAGTGCGCAGCACCTGGGCTTTTCGCCAGTTGCGCGACAGCCAATGGCAATGGGCGCTGGACTTCGTCTGCCACGGCGGCAGCTCATTGACCGCCTACCCGGACTACCAGCGTGTCGAGCGCCAGGCCGACGGAGTTTACCGGGTTACCAGCGAACGCCTGGCGCTCGACAC                                                                                                                                                                                                                         <  2:1268745/179‑1                                                                      AGCACCTGGGCTTTTCGCCAGTTGCGCGACAGCCAATGGCAATGGGCGCTGGACTTCGTCTGCCACGGCGGCAGCTCATTGACCGCCTACCCGGACTACCAGCGTGTCGAGCGCCAGGCCGACGGAGTTTACCGGGTTACCAGCGAACGCCTGGCG                                                                                                                                                                                                                                 >  2:123200/1‑156                                                                                  TTTCGCCAGTTGCGCGACAGCCAATGGCAATGGGCGCTGGACTTCGTCTGCCACGGCGGCAGCTCATTGACCGCCTACCCGGACTACCAGCGTGTCGAGCGCCAGGCCGACGGAGTTTACCGGGTTACCAGCGAACGCC                                                                                                                                                                                                                                      <  2:1098708/139‑1                                                                                                                                     cgCGGCGGCCGCTCATTGCCCGCCTACCCGGACGACCAGCGTGTCGAGCGCCAGGCCGACGGAGTTTACCGGGTTACCAGCGAACGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTC                                                                                                                                                                     <  1:426003/151‑1                                                                                                                                                                           GCGTGTCGAGCGCCAGGCCGACGGAGTTTACCGGGTTACCAGCGAACGCCTGGCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGT                                                                                                                                                                                  <  1:1195084/102‑1                                                                                                                                                                                               ACGGAGTTTACCGGGTTACCAGCGAACGCCTGGCGCTCGACACGCTGGTAGTCCGGGTA                                                                                                                                                                                                         <  2:648271/59‑1                                                                                                                                                                                                                               GCGCTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCACGTCCATGCACAGGCGCGGTAAAAAGCGGGCTTCGATG  <  2:787364/226‑1                                                                                                                                                                                                                                  CTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCA                                                                      <  1:608632/155‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTACAGCATCTGGTCAGCATGGCCTTGGGCAGCGGTTTTCGCCCGGAGCAACTGCTCGCCGAAGTGCGCAGCACCTGGGCTTTTCGCCAGTTGCGCGACAGCCAATGGCAATGGGCGCTGGACTTCGTCTGCCACGGCGGCAGCTCATTGACCGCCTACCCGGACTACCAGCGTGTCGAGCGCCAGGCCGACGGAGTTTACCGGGTTACCAGCGAACGCCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1260268‑1260043 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggcgcTCGACACGCTGGTAGTCCGGGTAGGCGGTCAATGAGCTGCCGCCGTGGCAGACGAAGTCCAGCGCCCATTGCCATTGGCTGTCGCGCAACTGGCGAAAAGCCCAGGTGCTGCGCACTTCGGCGAGCAGTTGCTCCGGGCGAAAACCGCTGCCCAAGGCCATGCTGACCAGATGCTGTACCAGCACGTCCATGCACAGGCGCGGTGAAAAGCGGGCTTCGATG  >  AE015451/1260090‑1260311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.